Evidence map›Paper›PMID 24326091›Full record

ArticleCarbohydrate research2014

Versatile on-resin synthesis of high mannose glycosylated asparagine with functional handles.

Rui Chen, Mark A Pawlicki, Thomas J Tolbert

Open access · greenAbstract read
In one paragraph

Article in Carbohydrate research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Rui ChenDepartment of Chemistry, Indiana University, Bloomington, IN 47405, United States.
Mark A PawlickiInterdisciplinary Biochemistry Graduate Program, Indiana University, Bloomington, IN 47405, United States.
Thomas J TolbertDepartment of Pharmaceutical Chemistry, The University of Kansas, 2095 Constant Avenue, Lawrence, KS 66047, United States. Electronic address: tolbert@ku.edu.
Indiana University Bloomington · US

Funding

The Role of Glycosylation in Regulating Immune ResponsesR01GM090080 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI TOLBERT, THOMAS J · 2010 to 2013
$1.1M
NIGMS NIH HHS R01 GM090080NIGMS NIH HHS R01GM090080
6 · The paper itself

Abstract

Here we present a synthetic route for solid phase synthesis of N-linked glycoconjugates containing high mannose oligosaccharides which allows the incorporation of useful functional handles on the N-terminus of asparagine. In this strategy, the C-terminus of an Fmoc protected aspartic acid residue is first attached to a solid phase support. The side chain of aspartic acid is protected by a 2-phenylisopropyl protecting group, which allows selective deprotection for the introduction of glycosylation. By using a convergent on-resin glycosylamine coupling strategy, an N-glycosidic linkage is successfully formed on the free side chain of the resin bound aspartic acid with a large high mannose oligosaccharide, Man8GlcNAc2, to yield N-linked high mannose glycosylated asparagine. The use of on-resin glycosylamine coupling provides excellent glycosylation yield, can be applied to couple other types of oligosaccharides, and also makes it possible to recover excess oligosaccharides conveniently after the on-resin coupling reaction. Useful functional handles including an alkene (p-vinylbenzoic acid), an alkyne (4-pentynoic acid), biotin, and 5-carboxyfluorescein are then conjugated onto the N-terminal amine of asparagine on-resin after the removal of the Fmoc protecting group. In this way, useful functional handles are introduced onto the glycosylated asparagine while maintaining the structural integrity of the reducing end of the oligosaccharide. The asparagine side chain also serves as a linker between the glycan and the functional group and preserves the native presentation of N-linked glycan which may aid in biochemical and structural studies. As an example of a biochemical study using functionalized high mannose glycosylated asparagine, a fluorescence polarization assay has been utilized to study the binding of the lectin Concanavalin A (ConA) using 5-carboxyfluorescein labeled high mannose glycosylated asparagine.

Indexed as

AsparagineAspartic AcidConcanavalin AFluorescenceGlycosylationMannoseOligosaccharidesResins, SyntheticSolid-Phase Synthesis TechniquesAsparagineAspartic AcidConcanavalin AMannoseOligosaccharidesResins, SyntheticFunctionalized oligosaccharideGlycosylamineGlycosylated asparagineHigh mannoseOn-resin couplingSolid phase synthesis

Identifiers

PMID24326091
PMCPMC3974579
OpenAlexW2027138377

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.