Evidence map›Paper›PMID 24324612›Full record

ArticlePloS one2013

Epidermal growth-factor-induced transcript isoform variation drives mammary cell migration.

Wolfgang J Köstler, Amit Zeisel, Cindy Körner, Jonathan M Tsai, Jasmine Jacob-Hirsch, Nir Ben-Chetrit, Kirti Sharma, Hadas Cohen-Dvashi, Assif Yitzhaky, Eric Lader and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  3. A cellular perspective of bias at G protein-coupled receptors.Protein science : a publication of the Protein Society · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 5 countries.

Wolfgang J KöstlerDepartments of Biological Regulation, Weizmann Institute of Science, Rehovot, Israel.
Amit Zeisel
Cindy Körner
Jonathan M Tsai
Jasmine Jacob-Hirsch
Nir Ben-Chetrit
Kirti Sharma
Hadas Cohen-Dvashi
Assif Yitzhaky
Eric Lader
Ulrich Tschulena
Gideon Rechavi
Eytan Domany
Stefan Wiemann
Yosef Yarden
Weizmann Institute of Science · ILHeidelberg University · DEGenomics (United Kingdom) · GBGerman Cancer Research Center · DEQiagen (United States) · USSheba Medical Center · ILStanford University · USTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Signal-induced transcript isoform variation (TIV) includes alternative promoter usage as well as alternative splicing and alternative polyadenylation of mRNA. To assess the phenotypic relevance of signal-induced TIV, we employed exon arrays and breast epithelial cells, which migrate in response to the epidermal growth factor (EGF). We show that EGF rapidly--within one hour--induces widespread TIV in a significant fraction of the transcriptome. Importantly, TIV characterizes many genes that display no differential expression upon stimulus. In addition, similar EGF-dependent changes are shared by a panel of mammary cell lines. A functional screen, which utilized isoform-specific siRNA oligonucleotides, indicated that several isoforms play essential, non-redundant roles in EGF-induced mammary cell migration. Taken together, our findings highlight the importance of TIV in the rapid evolvement of a phenotypic response to extracellular signals.

Indexed as

ExonsGenetic VariationTranscriptomeAlternative SplicingCell LineCell MovementEpidermal Growth FactorEpithelial CellsFemaleHumansMammary Glands, HumanOligonucleotide Array Sequence AnalysisPolyadenylationRNA, MessengerRNA, Small InterferingSignal TransductionEpidermal Growth FactorRNA, MessengerRNA, Small Interfering

Identifiers

PMID24324612
PMCPMC3855657
OpenAlexW1969513814

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.