Evidence map›Paper›PMID 24324011›Full record

ArticleMolecular and cellular biology2014

Rad53 downregulates mitotic gene transcription by inhibiting the transcriptional activator Ndd1.

Ellen R Edenberg, Ajay Vashisht, Jennifer A Benanti, James Wohlschlegel, David P Toczyski

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Checkpoint Responses to DNA Double-Strand Breaks.Annual review of biochemistry · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Hst3 is turned over by a replication stress-responsive SCF(Cdc4) phospho-degron.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Ellen R EdenbergDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California, USA.
Ajay Vashisht
Jennifer A Benanti
James Wohlschlegel
David P Toczyski
University of California, Los Angeles · USUniversity of California, San Francisco · USUniversity of Massachusetts Chan Medical School · US

Funding

GENETICS OF EUCARYOTIC AND PROCARYOTIC ORGANISMST32GM007810 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ASHRAFI, KAVEH, NARLIKAR, GEETA J · 1985 to 2020
$15.1M
Regulation and Targets of the DNA Damage CheckpointR01GM059691 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI TOCZYSKI, DAVID PAUL · 1999 to 2015
$5.8M
Proteolytic Control of Iron Metabolism by the Ubiquitin Ligase FBXL5R01GM089778 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WOHLSCHLEGEL, JAMES AKIRA · 2010 to 2023
$4.0M
Regulation of Cellular Growth and Division by Ubiquitin-Mediated ProteolysisR00GM085013 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BENANTI, JENNIFER A · 2010 to 2012
$742k
NIGMS NIH HHS GM059691NIGMS NIH HHS GM089778NIGMS NIH HHS R00 GM085013NIGMS NIH HHS R00GM085013NIGMS NIH HHS R01 GM059691NIGMS NIH HHS R01 GM089778NIGMS NIH HHS T32 GM007810
6 · The paper itself

Abstract

The 33 genes in the Saccharomyces cerevisiae mitotic CLB2 transcription cluster have been known to be downregulated by the DNA damage checkpoint for many years. Here, we show that this is mediated by the checkpoint kinase Rad53 and the dedicated transcriptional activator of the cluster, Ndd1. Ndd1 is phosphorylated in response to DNA damage, which blocks recruitment to promoters and leads to the transcriptional downregulation of the CLB2 cluster. Finally, we show that downregulation of Ndd1 is an essential function of Rad53, as a hypomorphic ndd1 allele rescues RAD53 deletion.

Indexed as

MitosisTranscription, GeneticAnimalsCell Cycle ProteinsCheckpoint Kinase 2DNA DamageDown-RegulationGene Expression Regulation, FungalHumansPromoter Regions, GeneticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsCell Cycle ProteinsCheckpoint Kinase 2NDD1 protein, S cerevisiaeRAD53 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID24324011
PMCPMC3911491
OpenAlexW2137281616

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.