Evidence map›Paper›PMID 24319668›Full record

ArticleStem cell reports2013

Analysis of induced pluripotent stem cells from a BRCA1 mutant family.

Abigail A Soyombo, Yipin Wu, Lauren Kolski, Jonathan J Rios, Dinesh Rakheja, Alice Chen, James Kehler, Heather Hampel, Alanna Coughran, Theodora S Ross

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
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  10. The Use of Stem Cell-Derived Organoids in Disease Modeling: An Update.International journal of molecular sciences · 2021
    Review
  11. Review
  12. Article
  13. Review
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  15. iPSC-Derived Embryoid Bodies as Models of c-International journal of molecular sciences · 2019
    Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Abigail A SoyomboDepartment of Internal Medicine, High Risk Cancer Genetics Program, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Yipin Wu
Lauren Kolski
Jonathan J Rios
Dinesh Rakheja
Alice Chen
James Kehler
Heather Hampel
Alanna Coughran
Theodora S Ross
The University of Texas Southwestern Medical Center · USCancer Genetics (United States) · USTexas Scottish Rite Hospital for Children · USThe Ohio State University · US

Funding

Huntington Interacting Protein-1(HIP1) and the Promotion of NeoplasiaR01CA098730 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI ROSS, THEODORA S · 2003 to 2012
$2.6M
MECHANISM OF TRANSFORMATION BY HIP1/PDGFBRR01CA082363 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ROSS, THEODORA S · 2000 to 2004
$1.3M
NCI NIH HHS R01 CA082363NCI NIH HHS R01 CA098730NCI NIH HHS R01 CA098730-01NCI NIH HHS R01 CA82363-03
6 · The paper itself

Abstract

Understanding BRCA1 mutant cancers is hampered by difficulties in obtaining primary cells from patients. We therefore generated and characterized 24 induced pluripotent stem cell (iPSC) lines from fibroblasts of eight individuals from a BRCA1 5382insC mutant family. All BRCA1 5382insC heterozygous fibroblasts, iPSCs, and teratomas maintained equivalent expression of both wild-type and mutant BRCA1 transcripts. Although no difference in differentiation capacity was observed between BRCA1 wild-type and mutant iPSCs, there was elevated protein kinase C-theta (PKC-theta) in BRCA1 mutant iPSCs. Cancer cell lines with BRCA1 mutations and hormone-receptor-negative breast cancers also displayed elevated PKC-theta. Genome sequencing of the 24 iPSC lines showed a similar frequency of reprogramming-associated de novo mutations in BRCA1 mutant and wild-type iPSCs. These data indicate that iPSC lines can be derived from BRCA1 mutant fibroblasts to study the effects of the mutation on gene expression and genome stability.

Indexed as

Cell LineMutationBRCA1 ProteinCell DifferentiationCells, CulturedFemaleFibroblastsGenome, HumanHeterozygoteHumansInduced Pluripotent Stem CellsIsoenzymesPedigreeProtein Kinase CProtein Kinase C-thetaRNA, MessengerBRCA1 ProteinIsoenzymesPRKCQ protein, humanProtein Kinase CProtein Kinase C-thetaRNA, Messenger

Identifiers

PMID24319668
PMCPMC3849250
OpenAlexW1994834890

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.