Evidence map›Paper›PMID 24319255›Full record

ArticleJournal of experimental botany2014

The CCAAT box-binding transcription factor NF-YA1 controls rhizobial infection.

Philippe Laporte, Agnes Lepage, Joëlle Fournier, Olivier Catrice, Sandra Moreau, Marie-Françoise Jardinaud, Jeong-Hwan Mun, Estibaliz Larrainzar, Douglas R Cook, Pascal Gamas and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 149 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. TheProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. The Regulation of Pea (Frontiers in plant science · 2022
    Article
  17. NF-YB family transcription factors inFrontiers in microbiology · 2022
    Article
  18. Article
  19. Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Philippe LaporteINRA, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR441, Castanet-Tolosan, F-31326, France.
Agnes Lepage
Joëlle Fournier
Olivier Catrice
Sandra Moreau
Marie-Françoise Jardinaud
Jeong-Hwan Mun
Estibaliz Larrainzar
Douglas R Cook
Pascal Gamas
Andreas Niebel
Centre National de la Recherche Scientifique · FRLaboratoire des Interactions Plantes Micro-Organismes · FRUniversity of California, Davis · USNational Academy of Agricultural Science · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Symbiosis between legume plants and soil rhizobia culminates in the formation of a novel root organ, the 'nodule', containing bacteria differentiated as facultative nitrogen-fixing organelles. MtNF-YA1 is a Medicago truncatula CCAAT box-binding transcription factor (TF), formerly called HAP2-1, highly expressed in mature nodules and required for nodule meristem function and persistence. Here a role for MtNF-YA1 during early nodule development is demonstrated. Detailed expression analysis based on RNA sequencing, quantitiative real-time PCR (qRT-PCR), as well as promoter-β-glucuronidase (GUS) fusions reveal that MtNF-YA1 is first induced at the onset of symbiotic development during preparation for, and initiation and progression of, symbiotic infection. Moreover, using a new knock-out mutant, Mtnf-ya1-1, it is shown that MtNF-YA1 controls infection thread (IT) progression from initial root infection through colonization of nodule tissues. Extensive confocal and electronic microscopic observations suggest that the bulbous and erratic IT growth phenotypes observed in Mtnf-ya1-1 could be a consequence of the fact that walls of ITs in this mutant are thinner and less coherent than in the wild type. It is proposed that MtNF-YA1 controls rhizobial infection progression by regulating the formation and the wall of ITs.

Indexed as

Base SequenceGene Expression Regulation, PlantGenetic Complementation TestMedicago truncatulaMutationPhenotypePlant ProteinsRoot Nodules, PlantSinorhizobium melilotiSymbiosisTranscription FactorsPlant ProteinsTranscription FactorsCCAAT box-binding factorinfectioninfection threadMedicago truncatulaNF-YAnodule developmentrhizobiumsymbiosis.

Identifiers

PMID24319255
PMCPMC3904707
OpenAlexW2140333306

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.