Evidence map›Paper›PMID 24319057›Full record

ArticleMolecular & cellular proteomics : MCP2014

Correlation of actin crosslinker and capper expression levels with stereocilia growth phases.

Matthew R Avenarius, Katherine W Saylor, Megan R Lundeberg, Phillip A Wilmarth, Jung-Bum Shin, Kateri J Spinelli, James M Pagana, Leonardo Andrade, Bechara Kachar, Dongseok Choi and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Molecular Composition of Vestibular Hair Bundles.Cold Spring Harbor perspectives in medicine · 2019
    Review
  9. Null Mutation of theG3 (Bethesda, Md.) · 2018
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Genetics of auditory mechano-electrical transduction.Pflugers Archiv : European journal of physiology · 2015
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Matthew R AvenariusOregon Hearing Research Center and Vollum Institute, Oregon Health and Science University, Portland, Oregon 97239;
Katherine W Saylor
Megan R Lundeberg
Phillip A Wilmarth
Jung-Bum Shin
Kateri J Spinelli
James M Pagana
Leonardo Andrade
Bechara Kachar
Dongseok Choi
Larry L David
Peter G Barr-Gillespie
Oregon Health & Science University · USVollum Institute · USNational Institute on Deafness and Other Communication Disorders · US

Funding

Structural and Molecular Basis of Transduction in Auditory Sensory OrgansZIADC000002 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI KACHAR, BECHARA · 2009 to 2025
$38.3M
Hair-Bundle ProteinsR01DC002368 · NIDCD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Peter Gordon Barr-Gillespie · 1994 to 2026
$11.3M
PORTLAND AREA COMMUNICATION RESEARCH CORE CENTERP30DC005983 · NIDCD · OREGON HEALTH & SCIENCE UNIVERSITY · PI NUTTALL, ALFRED L · 2003 to 2017
$9.0M
MULTIDISCIPLINARY TRAINING IN NEUROENDOCRINOLOGYT32DK007680 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI GOODMAN, RICHARD H. · 1991 to 2015
$6.8M
Hair Bundle Structure and DynamicsR01DC011034 · NIDCD · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARR-GILLESPIE, PETER GORDON · 2010 to 2024
$6.4M
PROTEIN CLEAVAGE SITES IN EXPERIMENTAL CATARACTOUS LENSR01EY007755 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI DAVID, LARRY L · 1995 to 2014
$3.6M
LTQ XL Linear Ion Trap Mass SpectrometerS10RR025571 · NCRR · OREGON HEALTH & SCIENCE UNIVERSITY · PI DAVID, LARRY L · 2009 to 2009
$389k
NCRR NIH HHS S10 RR025571NEI NIH HHS R01 EY007755NIDCD NIH HHS P30 DC005983NIDCD NIH HHS R01 DC002368NIDCD NIH HHS R01 DC011034NIDDK NIH HHS T32 DK007680
6 · The paper itself

Abstract

During development of the chick cochlea, actin crosslinkers and barbed-end cappers presumably influence growth and remodeling of the actin paracrystal of hair cell stereocilia. We used mass spectrometry to identify and quantify major actin-associated proteins of the cochlear sensory epithelium from E14 to E21, when stereocilia widen and lengthen. Tight actin crosslinkers (i.e. fascins, plastins, and espin) are expressed dynamically during cochlear epithelium development between E7 and E21, with FSCN2 replacing FSCN1 and plastins remaining low in abundance. Capping protein, a barbed-end actin capper, is located at stereocilia tips; it is abundant during growth phase II, when stereocilia have ceased elongating and are increasing in diameter. Capping protein levels then decline during growth phase III, when stereocilia reinitiate barbed-end elongation. Although actin crosslinkers are readily detected by electron microscopy in developing chick cochlea stereocilia, quantitative mass spectrometry of stereocilia isolated from E21 chick cochlea indicated that tight crosslinkers are present there in stoichiometric ratios relative to actin that are much lower than their ratios for vestibular stereocilia. These results demonstrate the value of quantitation of global protein expression in chick cochlea during stereocilia development.

Indexed as

Actin Capping ProteinsActinsAnimalsChick EmbryoCochleaEmbryonic DevelopmentEpitheliumGene Expression Regulation, DevelopmentalHair Cells, AuditoryMass SpectrometryMicrofilament ProteinsProtein BindingStereociliaActin Capping ProteinsActinsMicrofilament Proteins

Identifiers

PMID24319057
PMCPMC3916657
OpenAlexW2136285830

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.