Evidence map›Paper›PMID 24319011›Full record

ArticleMicrobiologyOpen2014

Roles of rpoS-activating small RNAs in pathways leading to acid resistance of Escherichia coli.

Geunu Bak, Kook Han, Daun Kim, Younghoon Lee

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  5. Article
  6. Advances in sRNA-mediated regulation ofFrontiers in cellular and infection microbiology · 2025
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  18. Article
  19. Impact of bacterial sRNAs in stress responses.Biochemical Society transactions · 2017
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Geunu BakDepartment of Chemistry, KAIST, Daejeon, 305-701, Korea.
Kook Han
Daun Kim
Younghoon Lee
Korea Advanced Institute of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli and related enteric bacteria can survive under extreme acid stress condition at least for several hours. RpoS is a key factor for acid stress management in many enterobacteria. Although three rpoS-activating sRNAs, DsrA, RprA, and ArcZ, have been identified in E. coli, it remains unclear how these small RNA molecules participate in pathways leading to acid resistance (AR). Here, we showed that overexpression of ArcZ, DsrA, or RprA enhances AR in a RpoS-dependent manner. Mutant strains with deletion of any of three sRNA genes showed lowered AR, and deleting all three sRNA genes led to more severe defects in protecting against acid stress. Overexpression of any of the three sRNAs fully rescued the acid tolerance defects of the mutant strain lacking all three genes, suggesting that all three sRNAs perform the same function in activating RpoS required for AR. Notably, acid stress led to the induction of DsrA and RprA but not ArcZ.

Indexed as

AcidsAdaptation, PhysiologicalAraC Transcription FactorBacterial ProteinsDrug Resistance, BacterialEnzyme ActivationEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGlutamate DecarboxylaseHydrogen-Ion ConcentrationMembrane ProteinsRNA, BacterialRNA, Small UntranslatedRNA StabilitySigma FactorAcidsAraC Transcription FactorBacterial ProteinsDsrA RNA, E coliEscherichia coli ProteinsgadA protein, E coligadB protein, E coliGadX protein, E coliGlutamate DecarboxylaseMembrane ProteinsRNA, BacterialRNA, Small UntranslatedSigma Factorsigma factor KatF protein, BacteriaAcid resistanceEscherichia coliRpoSsmall noncoding RNA.

Identifiers

PMID24319011
PMCPMC3937726
OpenAlexW1986487786

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.