Evidence map›Paper›PMID 24317399›Full record

ArticleJournal of bacteriology2014

Structural modeling and physicochemical characterization provide evidence that P66 forms a β-barrel in the Borrelia burgdorferi outer membrane.

Melisha R Kenedy, Amit Luthra, Arvind Anand, Joshua P Dunn, Justin D Radolf, Darrin R Akins

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 38 citations in OpenAlex.

  1. Borrelia surface proteins: new horizons in Lyme disease diagnosis.Applied microbiology and biotechnology · 2025
    Review
  2. Article
  3. Frontiers in cellular and infection microbiology · 2024
    Article
  4. Article
  5. Article
  6. Allelic Variants ofMicroorganisms · 2022
    Article
  7. Article
  8. Identification of amino acid domains ofFrontiers in cellular and infection microbiology · 2022
    Article
  9. Article
  10. Endogenous and Borrowed Proteolytic Activity in theMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  11. Article
  12. Lyme Disease in Humans.Current issues in molecular biology · 2021
    Article
  13. Lyme Disease Pathogenesis.Current issues in molecular biology · 2021
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Melisha R KenedyDepartment of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA.
Amit Luthra
Arvind Anand
Joshua P Dunn
Justin D Radolf
Darrin R Akins
UConn Health · USUniversity of Oklahoma Health Sciences Center · US

Funding

RpoS Regulation of Borrelia burgdorferi Genes in vivoR01AI029735 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI CAIMANO, MELISSA J, RADOLF, JUSTIN D · 1990 to 2022
$10.7M
Treponema pallidum Outer Membrane Proteins and Transition Metal AcquisitionR01AI026756 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI RADOLF, JUSTIN D · 1992 to 2017
$5.1M
Outer Membrane Proteins of Borrelia burgdorferiR01AI059373 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI AKINS, DARRIN R. · 2005 to 2022
$4.7M
T.pallidum Membrane Immunogens and Anti-Oxidant DefenseR37AI026756 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI RADOLF, JUSTIN D · 2002 to 2006
$1.8M
RpoS Regulation of Borrelia burgdorferi Genes in vivoR56AI029735 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI RADOLF, JUSTIN D · 2012 to 2012
$536k
Surface Lipoproteins and Serum Resistance in Borrelia burgdorferiR21AI085310 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI AKINS, DARRIN R. · 2010 to 2011
$402k
Outer membrane proteins of Borrelia burgdorferiR56AI059373 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI AKINS, DARRIN R. · 2011 to 2011
$329k
MEMBRANE PROTEINS OF TREPONEMA PALLIDUMR29AI026756 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI RADOLF, JUSTIN D. · 1988 to 1991
–
NIAID NIH HHS AI059373NIAID NIH HHS AI085310NIAID NIH HHS AI26756NIAID NIH HHS AI29735NIAID NIH HHS R01 AI026756NIAID NIH HHS R01 AI029735NIAID NIH HHS R01 AI059373NIAID NIH HHS R21 AI085310NIAID NIH HHS R37 AI026756NIAID NIH HHS R56 AI029735NIAID NIH HHS R56 AI059373
6 · The paper itself

Abstract

The Borrelia burgdorferi outer membrane (OM) contains numerous surface-exposed lipoproteins but a relatively low density of integral OM proteins (OMPs). Few membrane-spanning OMPs of B. burgdorferi have been definitively identified, and none are well characterized structurally. Here, we provide evidence that the borrelial OMP P66, a known adhesin with pore-forming activity, forms a β-barrel in the B. burgdorferi OM. Multiple computer-based algorithms predict that P66 forms a β-barrel with either 22 or 24 transmembrane domains. According to our predicted P66 topology, a lysine residue (K487) known to be sensitive to trypsin cleavage is located within a surface-exposed loop. When we aligned the mature P66 amino acid sequences from B. burgdorferi and B. garinii, we found that K487 was present only in the B. burgdorferi P66 protein sequence. When intact cells from each strain were treated with trypsin, only B. burgdorferi P66 was trypsin sensitive, indicating that K487 is surface exposed, as predicted. Consistent with this observation, when we inserted a c-Myc tag adjacent to K487 and utilized surface localization immunofluorescence, we detected the loop containing K487 on the surface of B. burgdorferi. P66 was examined by both Triton X-114 phase partitioning and circular dichroism, confirming that the protein is amphiphilic and contains extensive (48%) β-sheets, respectively. Moreover, P66 also was able to incorporate into liposomes and form channels in large unilamellar vesicles. Finally, blue native PAGE (BN-PAGE) revealed that under nondenaturing conditions, P66 is found in large complexes of ∼400 kDa and ∼600 kDa. Outer surface lipoprotein A (OspA) and OspB both coimmunoprecipitate with P66, demonstrating that P66 associates with OspA and OspB in B. burgdorferi. The combined computer-based structural analyses and supporting physicochemical properties of P66 provide a working model to further examine the porin and integrin-binding activities of this OMP as they relate to B. burgdorferi physiology and Lyme disease pathogenesis.

Indexed as

Antigens, BacterialAntigens, SurfaceBacterial Outer Membrane ProteinsBacterial ProteinsBacterial VaccinesBorrelia burgdorferiImmunoprecipitationLipoproteinsModels, MolecularPorinsProtein BindingProtein ConformationProtein MultimerizationProteolysisRecombinant Fusion ProteinsTrypsinAntigens, BacterialAntigens, SurfaceBacterial Outer Membrane ProteinsBacterial ProteinsBacterial VaccinesLipoproteinsOms66 protein, BorreliaOspA proteinOspB protein, Borrelia burgdorferiPorinsRecombinant Fusion ProteinsTrypsin

Identifiers

PMID24317399
PMCPMC3911182
OpenAlexW2006080034

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.