Evidence map›Paper›PMID 24316982›Full record

ArticleNature genetics2014

Transposon mutagenesis identifies genes driving hepatocellular carcinoma in a chronic hepatitis B mouse model.

Emilie A Bard-Chapeau, Anh-Tuan Nguyen, Alistair G Rust, Ahmed Sayadi, Philip Lee, Belinda Q Chua, Lee-Sun New, Johann de Jong, Jerrold M Ward, Christopher Ky Chin and 14 more

Abstract read
In one paragraph

Article in Nature genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 118 citations in OpenAlex.

  1. Trial
  2. Article
  3. RELA Ablation Contributes to Progression of Hepatocellular Carcinoma with TP53Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Advanced Nanotheranostics of CRISPR/Cas for Viral Hepatitis and Hepatocellular Carcinoma.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  19. Article
  20. Exploring liver cancer biology through functional genetic screens.Nature reviews. Gastroenterology & hepatology · 2021
    Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 4 countries.

Emilie A Bard-ChapeauInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Anh-Tuan NguyenInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Alistair G RustExperimental Cancer Genetics, Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1HH, UK.
Ahmed SayadiInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Philip LeeClinical Imaging Research Centre, National University of Singapore, Centre for Translation Medicine, 14 Medical Drive, #B1-01, 117599, Singapore.
Belinda Q ChuaInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Lee-Sun NewDepartment of Pharmacy, Faculty of Science, National University of Singapore, 18 Science Drive 4, 117543, Singapore.
Johann de JongDepartment of Molecular Carcinogenesis, The Netherlands Cancer Institute, Plesmanlaan 121, 1066CX Amsterdam.
Jerrold M WardInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Christopher Ky ChinInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Valerie ChewSingapore Immunology Network (SIgN), Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Han Chong TohNational Cancer Centre, Singapore.
Jean-Pierre AbastadoSingapore Immunology Network (SIgN), Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Touati BenoukrafCancer Science Institute of Singapore, National University of Singapore, Department of Pathology, National University Health System, Singapore.
Richie SoongCancer Science Institute of Singapore, National University of Singapore, Department of Pathology, National University Health System, Singapore.
Frederic A BardInstitute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Adam J DupuyDepartment of Anatomy and Cell Biology, Carver College of Medicine, University of Iowa, Iowa City, IA, 52242.
Randy L JohnsonDepartment of Biochemistry and Molecular Biology, University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, USA.
George K RaddaClinical Imaging Research Centre, National University of Singapore, Centre for Translation Medicine, 14 Medical Drive, #B1-01, 117599, Singapore.
Eric Cy ChanDepartment of Pharmacy, Faculty of Science, National University of Singapore, 18 Science Drive 4, 117543, Singapore.
Lodewyk Fa WesselsDepartment of Molecular Carcinogenesis, The Netherlands Cancer Institute, Plesmanlaan 121, 1066CX Amsterdam.
David J AdamsExperimental Cancer Genetics, Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1HH, UK.
Nancy A Jenkins *Institute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
Neal G Copeland *Institute Molecular and Cell Biology, Agency for Science, Technology and Research (ASTAR), Biopolis, Singapore.
National University of Singapore · SGThe Netherlands Cancer Institute · NLWellcome Sanger Institute · GBNational Cancer Centre Singapore · SGThe University of Texas MD Anderson Cancer Center · USUniversity of Iowa · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Cancer Research UK 13031Cancer Research UK A13031NCI NIH HHS P30 CA016672Wellcome Trust
6 · The paper itself

Abstract

The most common risk factor for developing hepatocellular carcinoma (HCC) is chronic infection with hepatitis B virus (HBV). To better understand the evolutionary forces driving HCC, we performed a near-saturating transposon mutagenesis screen in a mouse HBV model of HCC. This screen identified 21 candidate early stage drivers and a very large number (2,860) of candidate later stage drivers that were enriched for genes that are mutated, deregulated or functioning in signaling pathways important for human HCC, with a striking 1,199 genes being linked to cellular metabolic processes. Our study provides a comprehensive overview of the genetic landscape of HCC.

Indexed as

MutagenesisAnimalsCarcinoma, HepatocellularDisease Models, AnimalDNA Transposable ElementsGene Expression Regulation, NeoplasticHepatitis B, ChronicHumansLiver NeoplasmsMetabolic Networks and PathwaysMetabolomicsMiceMice, TransgenicMutagenesis, InsertionalPyruvic AcidDNA Transposable ElementsPyruvic Acid

Identifiers

PMID24316982
PMCPMC4131144
OpenAlexW2033141278

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.