Evidence map›Paper›PMID 24314169›Full record

ArticleBMC genomics2013

Kinotypes: stable species- and individual-specific profiles of cellular kinase activity.

Brett Trost, Jason Kindrachuk, Erin Scruten, Philip Griebel, Anthony Kusalik, Scott Napper

Abstract read
In one paragraph

Article in BMC genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Histidine kinases and the missing phosphoproteome from prokaryotes to eukaryotes.Laboratory investigation; a journal of technical methods and pathology · 2018
    Review
  5. Article
  6. Models and Methods to Investigate Acute Stress Responses in Cattle.Animals : an open access journal from MDPI · 2015
    Article
  7. A Synthetic Kinome Microarray Data Generator.Microarrays (Basel, Switzerland) · 2015
    Article
  8. Article
  9. Article
  10. Peptide Arrays for Kinome Analysis of Livestock Species.Frontiers in veterinary science · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Brett Trost
Jason Kindrachuk
Erin Scruten
Philip Griebel
Anthony Kusalik
Scott NapperVaccine and Infectious Disease Organization, University of Saskatchewan, Saskatoon, Canada. scott.napper@usask.ca.

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

backgroundRecently, questions have been raised regarding the ability of animal models to recapitulate human disease at the molecular level. It has also been demonstrated that cellular kinases, individually or as a collective unit (the kinome), play critical roles in regulating complex biology. Despite the intimate relationship between kinases and health, little is known about the variability, consistency and stability of kinome profiles across species and individuals.

resultsAs a preliminary investigation of the existence of species- and individual-specific kinotypes (kinome signatures), peptide arrays were employed for the analysis of peripheral blood mononuclear cells collected weekly from human and porcine subjects (n = 6) over a one month period. The data revealed strong evidence for species-specific signalling profiles. Both humans and pigs also exhibited evidence for individual-specific kinome profiles that were independent of natural changes in blood cell populations.

conclusionsSpecies-specific kinotypes could have applications in disease research by facilitating the selection of appropriate animal models or by revealing a baseline kinomic signature to which treatment-induced profiles could be compared. Similarly, individual-specific kinotypes could have implications in personalized medicine, where the identification of molecular patterns or signatures within the kinome may depend on both the levels of kinome diversity and temporal stability across individuals.

Indexed as

ProteomeProteomicsAdultAnimalsCluster AnalysisEnzyme ActivationFemaleGene Regulatory NetworksHumansLeukocytes, MononuclearMaleMiddle AgedPeptidesPhosphotransferasesProtein Interaction MappingProtein Interaction MapsPeptidesPhosphotransferasesProteome

Identifiers

PMID24314169
PMCPMC3924188

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.