Evidence map›Paper›PMID 24314092›Full record

ArticleBMC plant biology2013

Epigenetic rather than genetic factors may explain phenotypic divergence between coastal populations of diploid and tetraploid Limonium spp. (Plumbaginaceae) in Portugal.

Ana Sofia Róis, Carlos M Rodríguez López, Ana Cortinhas, Matthias Erben, Dalila Espírito-Santo, Michael J Wilkinson, Ana D Caperta

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Article in BMC plant biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

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17citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  7. Greenhouse Spatial Effects Detected in the Barley (Frontiers in plant science · 2020
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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Ana Sofia Róis
Carlos M Rodríguez López
Ana Cortinhas
Matthias Erben
Dalila Espírito-Santo
Michael J Wilkinson
Ana D CapertaPlant Diversity and Conservation Group, Centro de Botânica Aplicada à Agricultura (CBAA), Instituto Superior de Agronomia (ISA), Universidade de Lisboa, Tapada da Ajuda, 1349-017 Lisboa, Portugal. anadelaunay@isa.utl.pt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe genus Limonium Miller comprises annual and perennial halophytes that can produce sexual and/or asexual seeds (apomixis). Genetic and epigenetic (DNA methylation) variation patterns were investigated in populations of three phenotypically similar putative sexual diploid species (L. nydeggeri, L. ovalifolium, L. lanceolatum), one sexual tetraploid species (L. vulgare) and two apomict tetraploid species thought to be related (L. dodartii, L. multiflorum). The extent of morphological differentiation between these species was assessed using ten diagnostic morphometric characters.

resultsA discriminant analysis using the morphometric variables reliably assigns individuals into their respective species groups. We found that only modest genetic and epigenetic differentiation was revealed between species by Methylation Sensitive Amplification Polymorphism (MSAP). However, whilst there was little separation possible between ploidy levels on the basis of genetic profiles, there was clear and pronounced interploidy discrimination on the basis of epigenetic profiles. Here we investigate the relative contribution of genetic and epigenetic factors in explaining the complex phenotypic variability seen in problematic taxonomic groups such as Limonium that operate both apomixis and sexual modes of reproduction.

conclusionsOur results suggest that epigenetic variation might be one of the drivers of the phenotypic divergence between diploid and tetraploid taxa and discuss that intergenome silencing offers a plausible mechanistic explanation for the observed phenotypic divergence between these microspecies. These results also suggest that epigenetic profiling offer an additional tool to infer ploidy level in stored specimens and that stable epigenetic change may play an important role in apomict evolution and species recognition.

Indexed as

BiodiversityDiploidyEcosystemEpigenesis, GeneticTetraploidyDiscriminant AnalysisDNA MethylationGeographyPhenotypePlumbaginaceaePolymorphism, GeneticPortugalPrincipal Component AnalysisSeawaterSpecies Specificity

Identifiers

PMID24314092
PMCPMC3884021

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.