Evidence map›Paper›PMID 24314051›Full record

ArticleBMC cell biology2013

ERAD and protein import defects in a sec61 mutant lacking ER-lumenal loop 7.

Thomas Tretter, Fábio P Pereira, Ozlem Ulucan, Volkhard Helms, Susanne Allan, Kai-Uwe Kalies, Karin Römisch

Open access · goldAbstract read
In one paragraph

Article in BMC cell biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Sec61 blockade by mycolactone inhibits antigen cross-presentation independently of endosome-to-cytosol export.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Glycosylation-directed quality control of protein folding.Nature reviews. Molecular cell biology · 2015
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Thomas Tretter
Fábio P Pereira
Ozlem Ulucan
Volkhard Helms
Susanne Allan
Kai-Uwe Kalies
Karin RömischDepartment of Microbiology, Faculty of Natural Sciences and Technology VIII, Saarland University, Campus A1,5, 66123 Saarbrücken, Germany. k.roemisch@mx.uni-saarland.de.
Saarland University · DEUniversity of Lübeck · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Sec61 channel mediates protein translocation across the endoplasmic reticulum (ER) membrane during secretory protein biogenesis, and likely also during export of misfolded proteins for ER-associated degradation (ERAD). The mechanisms of channel opening for the different modes of translocation are not understood so far, but the position of the large ER-lumenal loop 7 of Sec61p suggests a decisive role.

resultsWe show here that the Y345H mutation in L7 which causes diabetes in the mouse displays no ER import defects in yeast, but a delay in misfolded protein export. A complete deletion of L7 in Sec61p resulted in viable, cold- and tunicamycin-hypersensitive yeast cells with strong defects in posttranslational protein import of soluble proteins into the ER, and in ERAD of soluble substrates. Membrane protein ERAD was only moderately slower in sec61∆L7 than in wildtype cells. Although Sec61∆L7 channels were unstable in detergent, co-translational protein integration into the ER membrane, proteasome binding to Sec61∆L7 channels, and formation of hetero-heptameric Sec complexes were not affected.

conclusionsWe conclude that L7 of Sec61p is required for initiation of posttranslational soluble protein import into and misfolded soluble protein export from the ER, suggesting a key role for L7 in transverse gating of the Sec61 channel.

Indexed as

MutationAmino Acid SequenceAnimalsEndoplasmic ReticulumEndoplasmic Reticulum-Associated DegradationGene ExpressionMembrane Transport ProteinsMiceModels, MolecularMolecular Sequence DataProtein BindingProtein FoldingProtein Structure, SecondaryProtein Structure, TertiaryProtein TransportSaccharomyces cerevisiaeMembrane Transport ProteinsSaccharomyces cerevisiae ProteinsSEC61 protein, S cerevisiaeSEC Translocation Channels

Identifiers

PMID24314051
PMCPMC3897919
OpenAlexW2127740594

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.