Evidence map›Paper›PMID 24313910›Full record

ArticleTraffic (Copenhagen, Denmark)2014

Low copy numbers of DC-SIGN in cell membrane microdomains: implications for structure and function.

Ping Liu, Xiang Wang, Michelle S Itano, Aaron K Neumann, Aravinda M de Silva, Ken Jacobson, Nancy L Thompson

Open access · greenAbstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Secondary Sites of the C-type Lectin-Like Fold.Chemistry (Weinheim an der Bergstrasse, Germany) · 2024
    Review
  2. Article
  3. Dectin-1-Mediated DC-SIGN Recruitment toLife (Basel, Switzerland) · 2021
    Article
  4. Antigen structure affects cellular routing through DC-SIGN.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Superresolution imaging of viral protein trafficking.Medical microbiology and immunology · 2015
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ping LiuDepartment of Cell Biology and Physiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599-7090, USA.
Xiang Wang
Michelle S Itano
Aaron K Neumann
Aravinda M de Silva
Ken Jacobson
Nancy L Thompson
University of North Carolina at Chapel Hill · USUniversity of New Mexico · US

Funding

STRUCTUREU54GM064346 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI IMPERIALI, BARBARA · 2001 to 2010
$74.9M
Molecular Basis of Flavivirus Cross-Neutralization by Human AntibodiesR01AI107731 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DESILVA, ARAVINDA M. · 2013 to 2022
$5.3M
Structure and dynamics of membrane microdomains used for viral entry and egressR01GM041402 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JACOBSON, KENNETH A · 1989 to 2016
$4.8M
NIAID NIH HHS R01 AI107731NIAID NIH HHS R01-AI107731NIGMS NIH HHS GM-041402NIGMS NIH HHS GM-64346NIGMS NIH HHS R01 GM041402NIGMS NIH HHS U54 GM064346
6 · The paper itself

Abstract

Presently, there are few estimates of the number of molecules occupying membrane domains. Using a total internal reflection fluorescence microscopy (TIRFM) imaging approach, based on comparing the intensities of fluorescently labeled microdomains with those of single fluorophores, we measured the occupancy of DC-SIGN, a C-type lectin, in membrane microdomains. DC-SIGN or its mutants were labeled with primary monoclonal antibodies (mAbs) in either dendritic cells (DCs) or NIH3T3 cells, or expressed as GFP fusions in NIH3T3 cells. The number of DC-SIGN molecules per microdomain ranges from only a few to over 20, while microdomain dimensions range from the diffraction limit to > 1 µm. The largest fraction of microdomains, appearing at the diffraction limit, in either immature DCs or 3 T3 cells contains only 4-8 molecules of DC-SIGN, consistent with our preliminary super-resolution Blink microscopy estimates. We further show that these small assemblies are sufficient to bind and efficiently internalize a small (∼ 50 nm) pathogen, dengue virus, leading to infection of host cells.

Indexed as

AnimalsCell Adhesion MoleculesDC-Specific ICAM-3 Grabbing NonintegrinDendritic CellsDengue VirusHumansLectins, C-TypeMembrane MicrodomainsMiceMicroscopy, FluorescenceNIH 3T3 CellsProtein BindingReceptors, Cell SurfaceVirus InternalizationCell Adhesion MoleculesDC-Specific ICAM-3 Grabbing NonintegrinLectins, C-TypeReceptors, Cell SurfaceCD209C-type lectinsdenguemembrane microdomainsmicrodomain occupancyquantitative imagingtotal internal reflection fluorescence microscopy

Identifiers

PMID24313910
PMCPMC4104803
OpenAlexW1517018400

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.