Evidence map›Paper›PMID 24312501›Full record

Trial reportPloS one2013

Proteomic analysis reveals differentially regulated protein acetylation in human amyotrophic lateral sclerosis spinal cord.

Dong Liu, Chaoxu Liu, Junqiang Li, Kazem Azadzoi, Yun Yang, Zhou Fei, Kefeng Dou, Neil W Kowall, Han-Pil Choi, Fernando Vieira and 1 more

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Dong LiuVisiting scholars from Departments of Hepatobiliary Surgery, Gastroenterology and Neurosurgery, Xijing Hospital, Fourth Military Medical University, Xian, Shaanxi, China ; Departments of Surgery, Neurology and Urology, VA Boston Healthcare System and Boston University School of Medicine, Boston, Massachusetts, United States of America.
Chaoxu Liu
Junqiang Li
Kazem Azadzoi
Yun Yang
Zhou Fei
Kefeng Dou
Neil W Kowall
Han-Pil Choi
Fernando Vieira
Jing-Hua Yang
Boston University · USXijing Hospital · CNAmyotrophic Lateral Sclerosis Therapy Development Institute · USShandong University · CN

Funding

Neuropathology CoreP30AG013846 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI KOWALL, NEIL W. · 1996 to 2020
$29.1M
Role of RNA Editing by ADAR1 in InfectionK02AI060701 · NIAID · YALE UNIVERSITY · PI YANG, JINGHUA · 2004 to 2008
$524k
Mechanism of Bladder Overactivity in Pelvic IschemiaI01BX001428 · VA · VA BOSTON HEALTH CARE SYSTEM · PI AZADZOI, KAZEM M · 2013 to 2016
–
BLRD VA I01 BX001428NIAID NIH HHS K02 AI060701NIAID NIH HHS K02-AI-060701NIA NIH HHS AG013846NIA NIH HHS P30 AG013846
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) is a progressive fatal neurodegenerative disease that primarily affects motor neurons in the brain and spinal cord. Histone deacetylase (HDAC) inhibitors have neuroprotective effects potentially useful for the treatment of neurodegenerative diseases including ALS; however, the molecular mechanisms underlying their potential efficacy is not well understood. Here we report that protein acetylation in urea-soluble proteins is differently regulated in post-mortem ALS spinal cord. Two-dimensional electrophoresis (2-DE) analysis reveals several protein clusters with similar molecular weight but different charge status. Liquid chromatography and tandem mass spectrometry (LC-MS/MS) identifies glial fibrillary acidic protein (GFAP) as the dominant component in the protein clusters. Further analysis indicates six heavily acetylated lysine residues at positions 89, 153, 189, 218, 259 and 331 of GFAP. Immunoprecipitation followed by Western blotting confirms that the larger form of GFAP fragments are acetylated and upregulated in ALS spinal cord. Further studies demonstrate that acetylation of the proteins additional to GFAP is differently regulated, suggesting that acetylation and/or deacetylation play an important role in pathogenesis of ALS.

Indexed as

ProteomicsAcetylationAmyotrophic Lateral SclerosisFemaleHumansMaleNerve Tissue ProteinsSpinal CordNerve Tissue Proteins

Identifiers

PMID24312501
PMCPMC3846615
OpenAlexW1973116209

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.