Evidence map›Paper›PMID 24308916›Full record

ArticleGenomics, proteomics & bioinformatics2013

Identification of the phosphorylated residues in TveIF5A by mass spectrometry.

Laura Itzel Quintas-Granados, César López-Camarillo, Jesús Fandiño Armas, Guillermo Mendoza Hernandez, María Elizbeth Alvarez-Sánchez

Open access · goldAbstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Laura Itzel Quintas-GranadosGenomic Sciences Postgraduate, Autonomous University of Mexico City (UACM), CP 03100 Mexico City, Mexico.
César López-CamarilloGenomic Sciences Postgraduate, Autonomous University of Mexico City (UACM), CP 03100 Mexico City, Mexico.
Jesús Fandiño ArmasGenomic Sciences Postgraduate, Autonomous University of Mexico City (UACM), CP 03100 Mexico City, Mexico.
Guillermo Mendoza HernandezDepartment of Biochemistry, Faculty of Medicine, National Autonomous University of Mexico, CP 04510 Mexico City, Mexico.
María Elizbeth Alvarez-SánchezGenomic Sciences Postgraduate, Autonomous University of Mexico City (UACM), CP 03100 Mexico City, Mexico. Electronic address: maria.alvarez@uacm.edu.mx.
Universidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The initiation factor eIF5A in Trichomonas vaginalis (TveIF5A) is previously shown to undergo hypusination, phosphorylation and glycosylation. Three different pI isoforms of TveIF5A have been reported. The most acidic isoform (pI 5.2) corresponds to the precursor TveIF5A, whereas the mature TveIF5A appears to be the most basic isoform (pI 5.5). In addition, the intermediary isoform (pI 5.3) is found only under polyamine-depleted conditions and restored with exogenous putrescine. We propose that differences in PI are due to phosphorylation of the TveIF5A isoforms. Here, we have identified phosphorylation sites using mass spectrometry. The mature TveIF5A contains four phosphorylated residues (S3, T55, T78 and T82). Phosphorylation at S3 and T82 is also identified in the intermediary TveIF5A, while no phosphorylated residues are found in the precursor TveIF5A. It has been demonstrated that eIF5A proteins from plants and yeast are phosphorylated by a casein kinase 2 (CK2). Interestingly, a gene encoding a protein highly similar to CK2 (TvCK2) is found in T. vaginalis, which might be involved in the phosphorylation of TveIF5A in T. vaginalis.

Indexed as

Amino Acid SequenceEukaryotic Translation Initiation Factor 5AMass SpectrometryModels, MolecularMolecular Sequence DataPeptide Initiation FactorsPhosphorylationProtein IsoformsProtein Structure, TertiaryRNA-Binding ProteinsTrichomonas vaginalisEukaryotic Translation Initiation Factor 5APeptide Initiation FactorsProtein IsoformsRNA-Binding ProteinsCasein kinase 2Initiation factor eIF5APhosphorylationTrichomonas vaginalis

Identifiers

PMID24308916
PMCPMC4357829
OpenAlexW2092605391

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.