Evidence map›Paper›PMID 24304444›Full record

ArticleAging cell2014

Combined treatment of rapamycin and dietary restriction has a larger effect on the transcriptome and metabolome of liver.

Wilson C Fok, Alex Bokov, Jonathan Gelfond, Zhen Yu, Yiqiang Zhang, Mark Doderer, Yidong Chen, Martin Javors, William H Wood, Yongqing Zhang and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Aging cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 61 citations in OpenAlex.

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  14. The mTOR signaling pathway in cardiac aging.The journal of cardiovascular aging · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Wilson C FokDepartment of Cellular and Structural Biology, The University of Texas Health Science Center at San Antonio, San Antonio, TX, 78229, USA.
Alex Bokov
Jonathan Gelfond
Zhen Yu
Yiqiang Zhang
Mark Doderer
Yidong Chen
Martin Javors
William H Wood
Yongqing Zhang
Kevin G Becker
Arlan Richardson
Viviana I Pérez
The University of Texas Health Science Center at San Antonio · USNational Institute on Aging · USOregon State University · US

Funding

TRANSGENIC COREP30AG013319 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI RANDY STRONG, Adam Salmon · 1995 to 2026
$30.6M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthUL1TR001120 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A, HARGREAVES, KENNETH M · 2013 to 2017
$16.5M
Analysis of complex biological systems by microarray based gene expressionZICAG000616 · NIA · NATIONAL INSTITUTE ON AGING · PI DE, SUPRIYO · 2009 to 2025
$15.5M
TRAINING GRANT ON THE BIOLOGY OF AGINGT32AG021890 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Erzsebet Kokovay, JAMES FLOYD NELSON · 2003 to 2026
$11.4M
Can Rapamycin Retard Age-Related Diseases?RC2AG036613 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI RICHARDSON, ARLAN G. · 2009 to 2010
$5.2M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthKL2TR001118 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A, DOUGHERTY, DONALD M · 2013 to 2017
$3.4M
Intramural NIH HHSNCATS NIH HHS KL2 TR001118NCATS NIH HHS UL1 TR001120NIA NIH HHS 1P30-AG-13319NIA NIH HHS P30 AG013319NIA NIH HHS RC2 AG036613NIA NIH HHS T32 AG021890
6 · The paper itself

Abstract

Rapamycin (Rapa) and dietary restriction (DR) have consistently been shown to increase lifespan. To investigate whether Rapa and DR affect similar pathways in mice, we compared the effects of feeding mice ad libitum (AL), Rapa, DR, or a combination of Rapa and DR (Rapa + DR) on the transcriptome and metabolome of the liver. The principal component analysis shows that Rapa and DR are distinct groups. Over 2500 genes are significantly changed with either Rapa or DR when compared with mice fed AL; more than 80% are unique to DR or Rapa. A similar observation was made when genes were grouped into pathways; two-thirds of the pathways were uniquely changed by DR or Rapa. The metabolome shows an even greater difference between Rapa and DR; no metabolites in Rapa-treated mice were changed significantly from AL mice, whereas 173 metabolites were changed in the DR mice. Interestingly, the number of genes significantly changed by Rapa + DR when compared with AL is twice as large as the number of genes significantly altered by either DR or Rapa alone. In summary, the global effects of DR or Rapa on the liver are quite different and a combination of Rapa and DR results in alterations in a large number of genes and metabolites that are not significantly changed by either manipulation alone, suggesting that a combination of DR and Rapa would be more effective in extending longevity than either treatment alone.

Indexed as

Caloric RestrictionAnimalsGene Expression RegulationLiverMaleMetabolomeMetabolomicsMiceMice, Inbred C57BLPrincipal Component AnalysisSignal TransductionSirolimusTranscriptomeSirolimusdietary restrictionmetabolomerapamycintranscriptome

Identifiers

PMID24304444
PMCPMC3989927
OpenAlexW2102201441

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.