Evidence map›Paper›PMID 24302739›Full record

ArticleThe Journal of biological chemistry2014

Three different classes of aminotransferases evolved prephenate aminotransferase functionality in arogenate-competent microorganisms.

Matthieu Graindorge, Cécile Giustini, Alexandra Kraut, Lucas Moyet, Gilles Curien, Michel Matringe

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. New Insight into Aspartate Metabolic Pathways inInternational journal of molecular sciences · 2022
    Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Matthieu GraindorgeFrom the Commissariat à l'Energie Atomique, Direction des Sciences du Vivant, institut de Recherches en Technologies et en Sciences pour le Vivant, Laboratoire de Physiologie Cellulaire et Végétale, F-38054 Grenoble, France.
Cécile Giustini
Alexandra Kraut
Lucas Moyet
Gilles Curien
Michel Matringe
Centre National de la Recherche Scientifique · FRInstitut de Recherches en Technologies et Sciences pour le Vivant · FRInserm · FRLaboratoire de Physiologie Cellulaire

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aromatic amino acids phenylalanine and tyrosine represent essential sources of high value natural aromatic compounds for human health and industry. Depending on the organism, alternative routes exist for their synthesis. Phenylalanine and tyrosine are synthesized either via phenylpyruvate/4-hydroxyphenylpyruvate or via arogenate. In arogenate-competent microorganisms, an aminotransferase is required for the transamination of prephenate into arogenate, but the identity of the genes is still unknown. We present here the first identification of prephenate aminotransferases (PATs) in seven arogenate-competent microorganisms and the discovery that PAT activity is provided by three different classes of aminotransferase, which belong to two different fold types of pyridoxal phosphate enzymes: an aspartate aminotransferase subgroup 1β in tested α- and β-proteobacteria, a branched-chain aminotransferase in tested cyanobacteria, and an N-succinyldiaminopimelate aminotransferase in tested actinobacteria and in the β-proteobacterium Nitrosomonas europaea. Recombinant PAT enzymes exhibit high activity toward prephenate, indicating that the corresponding genes encode bona fide PAT. PAT functionality was acquired without other modification of substrate specificity and is not a general catalytic property of the three classes of aminotransferases.

Indexed as

Amino Acids, DicarboxylicBacteriaBacterial ProteinsCyclohexenesEvolution, MolecularTransaminasesHumansPyridoxal PhosphateTyrosineAmino Acids, DicarboxylicBacterial ProteinsCyclohexenesprephenate aminotransferasepretyrosinePyridoxal PhosphateTransaminasesTyrosineAminationAmino AcidBacterial MetabolismEnzymesTyrosine

Identifiers

PMID24302739
PMCPMC3916524
OpenAlexW2080251413

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.