Evidence map›Paper›PMID 24302650›Full record

ArticlePlant physiology2014

Double knockout mutants of Arabidopsis grown under normal conditions reveal that the plastidial phosphorylase isozyme participates in transitory starch metabolism.

Irina Malinova, Sebastian Mahlow, Saleh Alseekh, Tom Orawetz, Alisdair R Fernie, Otto Baumann, Martin Steup, Joerg Fettke

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in plant science · 2022
    Article
  18. Review
  19. Starch Granule Size and Morphology ofMolecules (Basel, Switzerland) · 2021
    Article
  20. Starch Granules inInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Irina MalinovaInstitute of Biochemistry and Biology, Department of Plant Physiology , University of Potsdam, Karl-Liebknecht-Strasse 24-25, Building 20, 14476 Potsdam-Golm, Germany.
Sebastian Mahlow
Saleh Alseekh
Tom Orawetz
Alisdair R Fernie
Otto Baumann
Martin Steup
Joerg Fettke
Institute of Biochemistry · ROUniversity of Potsdam · DEMax Planck Institute of Molecular Plant Physiology · DEMax Planck Society · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In leaves of two starch-related single-knockout lines lacking either the cytosolic transglucosidase (also designated as disproportionating enzyme 2, DPE2) or the maltose transporter (MEX1), the activity of the plastidial phosphorylase isozyme (PHS1) is increased. In both mutants, metabolism of starch-derived maltose is impaired but inhibition is effective at different subcellular sites. Two constitutive double knockout mutants were generated (designated as dpe2-1×phs1a and mex1×phs1b) both lacking functional PHS1. They reveal that in normally grown plants, the plastidial phosphorylase isozyme participates in transitory starch degradation and that the central carbon metabolism is closely integrated into the entire cell biology. All plants were grown either under continuous illumination or in a light-dark regime. Both double mutants were compromised in growth and, compared with the single knockout plants, possess less average leaf starch when grown in a light-dark regime. Starch and chlorophyll contents decline with leaf age. As revealed by transmission electron microscopy, mesophyll cells degrade chloroplasts, but degradation is not observed in plants grown under continuous illumination. The two double mutants possess similar but not identical phenotypes. When grown in a light-dark regime, mesophyll chloroplasts of dpe2-1×phs1a contain a single starch granule but under continuous illumination more granules per chloroplast are formed. The other double mutant synthesizes more granules under either growth condition. In continuous light, growth of both double mutants is similar to that of the parental single knockout lines. Metabolite profiles and oligoglucan patterns differ largely in the two double mutants.

Indexed as

Gene Knockout TechniquesArabidopsisArabidopsis ProteinsBiomassCarbohydrate MetabolismCarbonChlorophyllChromatography, AffinityCrosses, GeneticGlycogen Debranching Enzyme SystemIsoenzymesMaltoseMembrane Transport ProteinsMesophyll CellsMetabolomicsMutationArabidopsis ProteinsCarbonChlorophyllDPE2 protein, ArabidopsisGlycogen Debranching Enzyme SystemIsoenzymesMaltoseMembrane Transport ProteinsMEX1 protein, ArabidopsisPHS1 protein, ArabidopsisProtein Tyrosine PhosphatasesStarchSucrose

Identifiers

PMID24302650
PMCPMC3912115
OpenAlexW2038825201

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.