Evidence map›Paper›PMID 24302590›Full record

ArticleMolecular carcinogenesis2015

Alterations in RD(INK4/ARF) -mediated en bloc regulation of the INK4-ARF locus in human squamous cell carcinoma of the head and neck.

Ming J Poi, Thomas J Knobloch, Marta T Sears, Blake M Warner, Lana K Uhrig, Christopher M Weghorst, Junan Li

Abstract read
In one paragraph

Article in Molecular carcinogenesis, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ming J PoiDepartment of Pharmacy, The Arthur G. James Cancer Hospital and Richard J. Solove Research Institute, The Ohio State University, Columbus, Ohio.
Thomas J KnoblochDivision of Environmental Health Sciences, College of Public Health, The Ohio State University, Columbus, Ohio.
Marta T SearsDivision of Environmental Health Sciences, College of Public Health, The Ohio State University, Columbus, Ohio.
Blake M WarnerDivision of Environmental Health Sciences, College of Public Health, The Ohio State University, Columbus, Ohio.
Lana K UhrigDivision of Environmental Health Sciences, College of Public Health, The Ohio State University, Columbus, Ohio.
Christopher M WeghorstDivision of Environmental Health Sciences, College of Public Health, The Ohio State University, Columbus, Ohio.
Junan LiDivision of Environmental Health Sciences, College of Public Health, The Ohio State University, Columbus, Ohio.
The Ohio State University · US

Funding

STRUCTURE FUNCTION RELATIONSHIP OF TUMOR SUPRESSORSR01CA069472 · NCI · OHIO STATE UNIVERSITY · PI LI, JUNAN · 1996 to 2009
$2.4M
Food-Based Modulation of Biomarkers in Human Tissues at High-Risk for Oral CancerR01CA127368 · NCI · OHIO STATE UNIVERSITY · PI WEGHORST, CHRISTOPHER M · 2008 to 2012
$1.5M
Chemopreventive Agent-Responsive Genes in Oral CancerR21DE016361 · NIDCR · OHIO STATE UNIVERSITY · PI WEGHORST, CHRISTOPHER M · 2004 to 2005
$374k
NCI NIH HHS R01 CA069472NCI NIH HHS R01 CA127368NCI NIH HHS R01 CA69472NIDCR NIH HHS R21 DE016361
6 · The paper itself

Abstract

The presence of RD(INK4/ARF) (RD) enhancer in the INK4-ARF locus provides a novel mechanism to simultaneously increase the transcription of p15(INK4b) (p15), p14ARF (p14), and p16(INK4a) (p16). While such upregulation can be repressed through interactions between RD and oncoproteins CDC6 and BMI1, little is known about the involvement of RD in cancer. In this study we investigated RD deletions in 30 squamous cell carcinoma of the head and neck (SCCHN) and the patient-matched High At-Risk Mucosa specimens (HARM, "phenotypically normal" tissues neighboring SCCHN foci but beyond the surgical resection margin). RD was deleted (homozygously/heterozygously) in SCCHN and HARM at the incidence of 36.7% (11/30) and 13.3% (4/30), respectively. In comparison, no RD deletion was detected in 26 oral buccal brush biopsy specimens from healthy donors. Both p16 and p14 were lowly expressed in SCCHN and HARM, and their mRNA expression levels were positively associated with each other (P < 0.01). Moreover, BMI1 was highly expressed in both SCCHN and HARM, and BMI1 overexpression was associated with p16 downregulation in SCCHN (P < 0.05). These results indicate that RD deletion and BMI1 overexpression frequently occur in the early stage of oral carcinogenesis and BMI1 overexpression may downregulate the transcription of p16 and p14 through interfering with RD.

Indexed as

Gene Expression Regulation, NeoplasticGenetic LociCarcinoma, Squamous CellCyclin-Dependent Kinase Inhibitor p15Cyclin-Dependent Kinase Inhibitor p16FemaleGene DeletionHead and Neck NeoplasmsHumansMaleMiddle AgedPolycomb Repressive Complex 1Squamous Cell Carcinoma of Head and NeckTumor Suppressor Protein p14ARFBMI1 protein, humanCyclin-Dependent Kinase Inhibitor p15Cyclin-Dependent Kinase Inhibitor p16Polycomb Repressive Complex 1Tumor Suppressor Protein p14ARFBMI1en bloc regulationgenetic deletionRD enhancerthe INK4-ARF locus

Identifiers

PMID24302590
PMCPMC4102663
OpenAlexW1844595111

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.