Evidence map›Paper›PMID 24301056›Full record

ArticleEuropean journal of human genetics : EJHG2014

Further delineation of the SATB2 phenotype.

Dennis Döcker, Max Schubach, Moritz Menzel, Marita Munz, Christiane Spaich, Saskia Biskup, Deborah Bartholdi

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 102 citations in OpenAlex.

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  12. Genetic analysis of a child withExperimental and therapeutic medicine · 2023
    Article
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  14. Genes · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Dennis DöckerInstitute of Clinical Genetics, Klinikum Stuttgart, Stuttgart, Germany.
Max SchubachCeGaT GmbH, Tübingen, Germany.
Moritz MenzelCeGaT GmbH, Tübingen, Germany.
Marita MunzHertie Institute for Clinical Brain Research, Tübingen, Germany.
Christiane SpaichInstitute of Clinical Genetics, Klinikum Stuttgart, Stuttgart, Germany.
Saskia Biskup1] Institute of Clinical Genetics, Klinikum Stuttgart, Stuttgart, Germany [2] CeGaT GmbH, Tübingen, Germany [3] Hertie Institute for Clinical Brain Research, Tübingen, Germany.
Deborah BartholdiInstitute of Clinical Genetics, Klinikum Stuttgart, Stuttgart, Germany.
Klinikum Stuttgart · DECeGaT (Germany) · DEHertie Institute for Clinical Brain Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SATB2 is an evolutionarily highly conserved chromatin remodeling gene located on chromosome 2q33.1. Vertebrate animal models have shown that Satb2 has a crucial role in craniofacial patterning and osteoblast differentiation, as well as in determining the fates of neuronal projections in the developing neocortex. In humans, chromosomal translocations and deletions of 2q33.1 leading to SATB2 haploinsufficiency are associated with cleft palate (CP), facial dysmorphism and intellectual disability (ID). A single patient carrying a nonsense mutation in SATB2 has been described to date. In this study, we performed trio-exome sequencing in a 3-year-old girl with CP and severely delayed speech development, and her unaffected parents. Previously, the girl had undergone conventional and molecular karyotyping (microarray analysis), as well as targeted analysis for different diseases associated with developmental delay, including Angelman syndrome, Rett syndrome and Fragile X syndrome. No diagnosis could be established. Exome sequencing revealed a de novo nonsense mutation in the SATB2 gene (c.715C>T; p.R239*). The identification of a second patient carrying a de novo nonsense mutation in SATB2 confirms that this gene is essential for normal craniofacial patterning and cognitive development. Based on our data and the literature published so far, we propose a new clinically recognizable syndrome - the SATB2-associated syndrome (SAS). SAS is likely to be underdiagnosed and should be considered in children with ID, severe speech delay, cleft or high-arched palate and abnormal dentition with crowded and irregularly shaped teeth.

Indexed as

Genetic Association StudiesPhenotypeChild, PreschoolChromosome DeletionChromosomes, Human, Pair 2ExomeFaciesFemaleGene OrderGenetic LociGenotypeHumansMatrix Attachment Region Binding ProteinsMutationSequence Analysis, DNATranscription FactorsMatrix Attachment Region Binding ProteinsSATB2 protein, humanTranscription Factors

Identifiers

PMID24301056
PMCPMC4350596
OpenAlexW2089766675

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.