Evidence map›Paper›PMID 24297936›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Genome-block expression-assisted association studies discover malaria resistance genes in Anopheles gambiae.

Jun Li, Xiaohong Wang, Genwei Zhang, John I Githure, Guiyun Yan, Anthony A James

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  5. Review
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  11. Review
  12. Arsinothricin InhibitsMicroorganisms · 2023
    Article
  13. Article
  14. Targeting plasmodium α-tubulin-1 to block malaria transmission to mosquitoes.Frontiers in cellular and infection microbiology · 2023
    Article
  15. Novel systems to study vector-pathogen interactions in malaria.Frontiers in cellular and infection microbiology · 2023
    Review
  16. Review
  17. Article
  18. Gene drives gaining speed.Nature reviews. Genetics · 2022
    Review
  19. Review
  20. Studies of the Parasite-Midgut Interaction RevealFrontiers in cellular and infection microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jun LiDepartment of Chemistry and Biochemistry, University of Oklahoma, Norman, OK 73019.
Xiaohong Wang
Genwei Zhang
John I Githure
Guiyun Yan
Anthony A James
University of Oklahoma · USUniversity of California, Irvine · USInternational Centre of Insect Physiology and Ecology · KE

Funding

Ecology of African Highland MalariaR01AI050243 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI YAN, GUIYUN · 2001 to 2018
$8.8M
Research Training in Mosquito Genomics and Bioinformat*D43TW001505 · FIC · UNIVERSITY OF CALIFORNIA-IRVINE · PI Guiyun Yan · 2000 to 2026
$6.0M
Expression of Exogenous Genes in Vector MosquitoesR37AI029746 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JAMES, ANTHONY A. · 2007 to 2016
$3.6M
EXPRESSION OF EXOGENOUS GENES IN VECTOR MOSQUITOESR01AI029746 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JAMES, ANTHONY A. · 1989 to 2006
$1.7M
Gene Structure Variations and Malaria Resistance in Anopheles gambiaeR56AI081829 · NIAID · UNIVERSITY OF MINNESOTA · PI FALLON, ANN M · 2009 to 2009
$365k
FIC NIH HHS D43 TW001505NIAID NIH HHS 1R56AI081829-01A1NIAID NIH HHS AI29746NIAID NIH HHS R01 AI029746NIAID NIH HHS R01 AI050243NIAID NIH HHS R37 AI029746NIAID NIH HHS R56 AI081829
6 · The paper itself

Abstract

The malaria parasite-resistance island (PRI) of the African mosquito vector, Anopheles gambiae, was mapped to five genomic regions containing 80 genes, using coexpression patterns of genomic blocks. High-throughput sequencing identified 347 nonsynonymous single-nucleotide polymorphisms within these genes in mosquitoes from malaria-endemic areas in Kenya. Direct association studies between nonsynonymous single-nucleotide polymorphisms and Plasmodium falciparum infection identified three naturally occurring genetic variations in each of three genes (An. gambiae adenosine deaminase, fibrinogen-related protein 30, and fibrinogen-related protein 1) that were associated significantly with parasite infection. A role for these genes in the resistance phenotype was confirmed by RNA interference knockdown assays. Silencing fibrinogen-related protein 30 increased parasite infection significantly, whereas ablation of fibrinogen-related protein 1 transcripts resulted in mosquitoes nearly free of parasites. The discovered genes and single-nucleotide polymorphisms are anticipated to be useful in the development of tools for malaria control in endemic areas in Africa.

Indexed as

AnophelesInsect ProteinsPolymorphism, Single NucleotideAnimalsGene SilencingGenomeImmunity, InnateKenyaPlasmodium falciparumInsect Proteinschromosomal domainsgene expressiongenomicssyntenytraits

Identifiers

PMID24297936
PMCPMC3870758
OpenAlexW2051826356

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.