Evidence map›Paper›PMID 24297881›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Mechanistic characterization and crystal structure of a small molecule inactivator bound to plasminogen activator inhibitor-1.

Shih-Hon Li, Ashley A Reinke, Karen L Sanders, Cory D Emal, James C Whisstock, Jeanne A Stuckey, Daniel A Lawrence

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Review
  4. Article
  5. Article
  6. Neuroserpin: structure, function, physiology and pathology.Cellular and molecular life sciences : CMLS · 2021
    Review
  7. Review
  8. Article
  9. An aberrant STAT pathway is central to COVID-19.Cell death and differentiation · 2020
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Dual-reporter high-throughput screen for small-moleculeThe Journal of biological chemistry · 2019
    Article
  17. Article
  18. Article
  19. Review
  20. Serpin latency transition at atomic resolution.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Shih-Hon LiDepartments of Pathology and Internal Medicine, Division of Cardiovascular Medicine, University of Michigan Medical School, Ann Arbor, MI 48109.
Ashley A Reinke
Karen L Sanders
Cory D Emal
James C Whisstock
Jeanne A Stuckey
Daniel A Lawrence
University of Michigan–Ann Arbor · USEastern Michigan University · USMonash University · AU

Funding

Unraveling the role of tPA in the neurovascular unitR01HL055374 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David Antonetti, Daniel A Lawrence · 1995 to 2026
$8.6M
Thrombotic/Fibrinolytic Balance in Cardiac Transplant VasculopathyP01HL089407 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LAWRENCE, DANIEL A · 2008 to 2012
$7.9M
Mechanism of thrombolytic tPA induced intracerebral hemorrhage after strokeR01NS079639 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LAWRENCE, DANIEL A · 2012 to 2016
$1.7M
NHLBI NIH HHS HL089407NHLBI NIH HHS HL55374NHLBI NIH HHS P01 HL089407NHLBI NIH HHS R01 HL055374NINDS NIH HHS NS079639NINDS NIH HHS R01 NS079639
6 · The paper itself

Abstract

Plasminogen activator inhibitor type-1 (PAI-1) is a member of the serine protease inhibitor (serpin) family. Excessive PAI-1 activity is associated with human disease, making it an attractive pharmaceutical target. However, like other serpins, PAI-1 has a labile structure, making it a difficult target for the development of small molecule inhibitors, and to date, there are no US Food and Drug Administration-approved small molecule inactivators of any serpins. Here we describe the mechanistic and structural characterization of a high affinity inactivator of PAI-1. This molecule binds to PAI-1 reversibly and acts through an allosteric mechanism that inhibits PAI-1 binding to proteases and to its cofactor vitronectin. The binding site is identified by X-ray crystallography and mutagenesis as a pocket at the interface of β-sheets B and C and α-helix H. A similar pocket is present on other serpins, suggesting that this site could be a common target in this structurally conserved protein family.

Indexed as

Allosteric RegulationCrystallography, X-RayHumansPlasminogen Activator Inhibitor 1Protein BindingProtein Structure, SecondaryProtein Structure, TertiaryStructure-Activity RelationshipVitronectinPlasminogen Activator Inhibitor 1SERPINE1 protein, humanVitronectincancerfibrinolysisfibrosisthrombolysis

Identifiers

PMID24297881
PMCPMC3870673
OpenAlexW2118316826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.