Evidence map›Paper›PMID 24296945›Full record

ArticleLeukemia2014

Whole-exome sequencing in splenic marginal zone lymphoma reveals mutations in genes involved in marginal zone differentiation.

N Martínez, C Almaraz, J P Vaqué, I Varela, S Derdak, S Beltran, M Mollejo, Y Campos-Martin, L Agueda, A Rinaldi and 21 more

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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  8. Towards precision medicine in lymphoid malignancies.Journal of internal medicine · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

N MartínezCancer Genomics, IFIMAV Instituto de Formación e Investigación Marqués de Valdecilla, Santander, Spain.
C AlmarazCancer Genomics, IFIMAV Instituto de Formación e Investigación Marqués de Valdecilla, Santander, Spain.
J P VaquéCancer Genomics, IFIMAV Instituto de Formación e Investigación Marqués de Valdecilla, Santander, Spain.
I VarelaIBBTEC, UC-CSIC-SODERCAN, Instituto de Biomedicina y Biotecnología de Cantabria, Santander, Spain.
S DerdakCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
S BeltranCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
M MollejoDepartment of Pathology, Hospital Virgen de la Salud, Toledo, Spain.
Y Campos-MartinDepartment of Pathology, Hospital Virgen de la Salud, Toledo, Spain.
L AguedaCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
A RinaldiLymphoma and Genomics Research Program, IOR Institute of Oncology Research and Oncology Institute of Southern Switzerland, Bellinzona, Switzerland.
I Kwee1] Lymphoma and Genomics Research Program, IOR Institute of Oncology Research and Oncology Institute of Southern Switzerland, Bellinzona, Switzerland [2] Dalle Molle Institute for Artificial Intelligence (IDSIA), Manno, Switzerland [3] SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
M GutCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
J BlancCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
D OscierDepartment of Haematology, Royal Bournemouth Hospital, Bournemouth, UK.
J C StreffordDepartment of Cancer Genomics, University of Southampton, Southampton, UK.
J Martinez-LopezDepartment of Haematology, Hospital Universitario Doce de Octubre, Madrid, Spain.
A SalarDepartment of Haematology, Hospital del Mar, Barcelona, Spain.
F SoleDepartment of Cytogenetics, Hospital del Mar and Institut Josep Carreras (IJC), Barcelona, Spain.
J L Rodriguez-PeraltoDermatology Service, Hospital Universitario Doce de Octubre, Madrid, Spain.
C Diez-TascónDepartment of Pathology, Hospital de León, León, Spain.
J F GarcíaDepartment of Pathology, MD Anderson Cancer Center Madrid, Madrid, Spain.
M FragaDepartment of Pathology, Hospital Clínico Universitario de Santiago, Spain.
E SebastiánDepartment of Haematology, Hospital Clínico de Salamanca, Salamanca, Spain.
J AlvésDepartment of Pathology, Hospital Universitario La Paz, Madrid, Spain.
J MenárguezDepartment of Pathology, HGUGM, Madrid, Spain.
J González-CarreróDepartment of Pathology, Hospital Xeral Cíes, Vigo, Spain.
L F CasadoDepartment of Pathology, Hospital Virgen de la Salud, Toledo, Spain.
M BayesCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
F Bertoni1] Lymphoma and Genomics Research Program, IOR Institute of Oncology Research and Oncology Institute of Southern Switzerland, Bellinzona, Switzerland [2] Lymphoma Unit, IOSI Oncology Institute of Southern Switzerland, Bellinzona, Switzerland.
I GutCNAG Centro Nacional de Análisis Genómico, Barcelona, Spain.
M A Piris1] Cancer Genomics, IFIMAV Instituto de Formación e Investigación Marqués de Valdecilla, Santander, Spain [2] Department of Pathology, Hospital Universitario Marqués de Valdecilla, Santander, Spain.

Funding

Bloodwise 12011
6 · The paper itself

Abstract

Splenic marginal zone lymphoma (SMZL) is a B-cell neoplasm whose molecular pathogenesis remains fundamentally unexplained, requiring more precise diagnostic markers. Previous molecular studies have revealed 7q loss and mutations of nuclear factor κB (NF-κB), B-cell receptor (BCR) and Notch signalling genes. We performed whole-exome sequencing in a series of SMZL cases. Results confirmed that SMZL is an entity distinct from other low-grade B-cell lymphomas, and identified mutations in multiple genes involved in marginal zone development, and others involved in NF-κB, BCR, chromatin remodelling and the cytoskeleton.

Indexed as

Cell DifferentiationHigh-Throughput Nucleotide SequencingBiomarkers, TumorChromatin Assembly and DisassemblyCytoskeletonExomeHumansLymphoma, B-Cell, Marginal ZoneMutationNF-kappa BSignal TransductionSplenic NeoplasmsBiomarkers, TumorNF-kappa B

Identifiers

PMID24296945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.