Evidence map›Paper›PMID 24295516›Full record

ArticleBiotechnology for biofuels2013

Development of a forward genetic screen to isolate oil mutants in the green microalga Chlamydomonas reinhardtii.

Caroline Cagnon, Boris Mirabella, Hoa Mai Nguyen, Audrey Beyly-Adriano, Séverine Bouvet, Stéphan Cuiné, Fred Beisson, Gilles Peltier, Yonghua Li-Beisson

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Caroline Cagnon *CEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Boris Mirabella *CEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Hoa Mai NguyenCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Audrey Beyly-AdrianoCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Séverine BouvetCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Stéphan CuinéCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Fred BeissonCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Gilles PeltierCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Yonghua Li-BeissonCEA Cadarache, Institute of Environmental Biology and Biotechnology, Saint-Paul-lez-Durance F-13108, France.
Centre National de la Recherche Scientifique · FRInstitute of Environmental Biology and Biotechnology · FRITER · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOils produced by microalgae are precursors to biodiesel. To achieve a profitable production of biodiesel from microalgae, identification of factors governing oil synthesis and turnover is desirable. The green microalga Chlamydomonas reinhardtii is amenable to genetic analyses and has recently emerged as a model to study oil metabolism. However, a detailed method to isolate various types of oil mutants that is adapted to Chlamydomonas has not been reported.

resultsWe describe here a forward genetic approach to isolate mutants altered in oil synthesis and turnover from C. reinhardtii. It consists of a three-step screening procedure: a primary screen by flow cytometry of Nile red stained transformants grown in 96-deep-well plates under three sequential conditions (presence of nitrogen, then absence of nitrogen, followed by oil remobilization); a confirmation step using Nile red stained biological triplicates; and a validation step consisting of the quantification by thin layer chromatography of oil content of selected strains. Thirty-one mutants were isolated by screening 1,800 transformants generated by random insertional mutagenesis (1.7%). Five showed increased oil accumulation under the nitrogen-replete condition and 13 had altered oil content under nitrogen-depletion. All mutants were affected in oil remobilization.

conclusionThis study demonstrates that various types of oil mutants can be isolated in Chlamydomonas based on the method set-up here, including mutants accumulating oil under optimal biomass growth. The strategy conceived and the protocol set-up should be applicable to other microalgal species such as Nannochloropsis and Chlorella, thus serving as a useful tool in Chlamydomonas oil research and algal biotechnology.

Identifiers

PMID24295516
PMCPMC4176504
OpenAlexW2165815025

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.