Evidence map›Paper›PMID 24294828›Full record

ArticleJournal of proteome research2014

Conserved sequence repeats of IQGAP1 mediate binding to Ezrin.

Jing Liu, Jesse J Guidry, David K Worthylake

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jing LiuDepartment of Biochemistry and Molecular Biology, Louisiana State University Health Sciences Center , 1901 Perdido Street, New Orleans, Louisiana 70112, United States.
Jesse J Guidry
David K Worthylake
Louisiana State University Health Sciences Center New Orleans · US

Funding

IQGAP1 Structure and FunctionR01GM084072 · NIGMS · LSU HEALTH SCIENCES CENTER · PI WORTHYLAKE, DAVID · 2010 to 2014
$1.3M
NIGMS NIH HHS GM084072NIGMS NIH HHS R01 GM084072
6 · The paper itself

Abstract

Mammalian IQGAP proteins all feature multiple ∼50 amino acid sequence repeats near their N-termini, and little is known about the function of these "Repeats". We have expressed and purified the Repeats from human IQGAP1 to identify binding partners. We used mass spectrometry to identify 42 mouse kidney proteins that associate with the IQGAP1 Repeats including the ERM proteins ezrin, radixin, and moesin. ERM proteins have an N-terminal FERM domain (4.1, ezrin, radixin, moesin) through which they bind to protein targets and phosphatidylinositol 4,5-bisphosphate (PIP2) and a C-terminal actin-binding domain and function to link the actin cytoskeleton to distinct locations on the cell cortex. Isothermal titration calorimetry (ITC) reveals that the IQGAP1 Repeats directly bind to the ezrin FERM domain, while no binding is seen for full-length "autoinhibited" ezrin or a version of full-length ezrin intended to mimic the activated protein. ITC also indicates that the ezrin FERM domain binds to the Repeats from IQGAP2 but not the Repeats from IQGAP3. We conclude that IQGAP1 and IQGAP2 are positioned at the cell cortex by ERM proteins. We propose that the IQGAP3 Repeats may likewise bind to FERM domains for signaling purposes.

Indexed as

Amino Acid SequenceAnimalsCalorimetryConserved SequenceCytoskeletal ProteinsDNA, ComplementaryElectrophoresis, Gel, Two-DimensionalElectrophoresis, Polyacrylamide GelEzrinHumansMicePolymerase Chain ReactionProtein Bindingras GTPase-Activating ProteinsRepetitive Sequences, Amino AcidTandem Mass SpectrometryCytoskeletal ProteinsDNA, ComplementaryEzrinIQ motif containing GTPase activating protein 1ras GTPase-Activating Proteins

Identifiers

PMID24294828
PMCPMC3975686
OpenAlexW2093375164

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.