ArticleMolecular biology reports2014
Transcriptome characterization and sequencing-based identification of drought-responsive genes in potato.
Article in Molecular biology reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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Who cites it
33 citing papers in PubMed.
- Impact of redox control on transcriptional reprograming for salt tolerance in coastal rice landraces.Scientific reports · 2025Article
- Transcriptomics-proteomics analysis reveals StCOMT1 regulates drought, alkali and combined stresses in potato.Plant cell reports · 2025Article
- Overexpression ofInternational journal of molecular sciences · 2024Article
- Gene Expression Analysis for Drought Tolerance in Early Stage of Potato Plant Development.Biology · 2024Article
- Creating a zero amylose barley with high soluble sugar content by genome editing.Plant molecular biology · 2024Article
- Review
- Transcriptome Analysis of Two Tetraploid Potato Varieties under Water-Stress Conditions.International journal of molecular sciences · 2022Article
- Construction of drought stress regulation networks in potato based on SMRT and RNA sequencing data.BMC plant biology · 2022Article
- Exploring the parameters of central redox hub for screening salinity tolerant rice landraces of coastal Bangladesh.Scientific reports · 2022Article
- Transcriptome profiling shows a rapid variety-specific response in two Andigenum potato varieties under drought stress.Frontiers in plant science · 2022Article
- Differential response of physiology and metabolic response to drought stress in different sweetpotato cultivars.PloS one · 2022Article
- An optimized protocol for stepwise optimization of real-time RT-PCR analysis.Horticulture research · 2021Article
- Modern Approaches for Transcriptome Analyses in Plants.Advances in experimental medicine and biology · 2021Article
- Transcriptional and Metabolic Profiling of Potato Plants Expressing a Plastid-Targeted Electron Shuttle Reveal Modulation of Genes Associated to Drought Tolerance by Chloroplast Redox Poise.International journal of molecular sciences · 2020Article
- Transcriptome Response to Drought, Rehydration and Re-Dehydration in Potato.International journal of molecular sciences · 2019Article
- Comprehensive Influences of Overexpression of a MYB Transcriptor Regulating Anthocyanin Biosynthesis on Transcriptome and Metabolome of Tobacco Leaves.International journal of molecular sciences · 2019Article
- Transgenic RXLR EffectorInternational journal of molecular sciences · 2019Article
- Transcriptome Profiling Reveals Effects of Drought Stress on Gene Expression in Diploid Potato Genotype P3-198.International journal of molecular sciences · 2019Article
- Enriched networks 'nucleoside/nucleotide and ribonucleoside/ribonucleotide metabolic processes' and 'response to stimulus' potentially conferred to drought adaptation of the epiphytic orchidPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- Transcriptome Profiling and Characterization of Drought-Tolerant Potato Plant (Molecules and cells · 2018Article
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7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Potato (Solanum tubersosum L.) is relatively vulnerable to abiotic stress conditions such as drought, but the tolerance mechanisms to such stress in potato are largely unknown. To gain insight into the transcriptome dynamics that are associated with drought stress, genome-wide gene expression profile was conducted by Solexa sequencing to generate a large dataset and a comprehensive transcriptome profile for potato. Here, we report a reference for the potato transcriptome using leaf tissues under drought-stressed condition from a local potato cultivar 'Longshu 3'. Analysis of 86,965,482 RNA-Seq reads permitted the detection and quantification of expression levels of 7,284 genes at transcriptional levels, among them, 6,754 genes were enriched in draught-treated leaves while 6,419 in control. We identified 842 drought-responsive up-regulated and 494 down-regulated candidate genes with significantly differentially expression under continued drought stress treatments. Those differently expressed genes were mostly enriched in 89 gene categories and 21 KEGG pathways. Drought-stressed leaves had increased expression of genes involved in stress response compared with control leaves. A subset of differentially expressed genes associated with drought response was examined using quantitative real-time PCR. These results provide a broad spectrum of candidate genes that are essential for understanding the molecular regulation of potato in response to abiotic stresses.
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