Evidence map›Paper›PMID 24289409›Full record

ArticleThe Review of scientific instruments2013

An optics-based variable-temperature assay system for characterizing thermodynamics of biomolecular reactions on solid support.

Yiyan Fei, James P Landry, Yanhong Li, Hai Yu, Kam Lau, Shengshu Huang, Harshal A Chokhawala, Xi Chen, X D Zhu

Abstract read
In one paragraph

Article in The Review of scientific instruments, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Evaluation of Kinetics Using Label-Free Optical Biosensors.Instrumentation science & technology · 2017
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yiyan FeiDepartment of Physics, University of California, One Shields Avenue, Davis, California 95616, USA.
James P Landry
Yanhong Li
Hai Yu
Kam Lau
Shengshu Huang
Harshal A Chokhawala
Xi Chen
X D Zhu

Funding

High-Speed Label-Free Optical Detection System for Small-Molecule MicroarraysR01HG003827 · NHGRI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ZHU, XIANGDONG · 2006 to 2009
$2.2M
Studies of Naturally Occurring Structurally Modified CarbohydratesR01GM076360 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, XI · 2006 to 2010
$1.9M
Oligosaccharides as antimicrobials and prebioticsR01HD065122 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, XI · 2010 to 2013
$1.8M
NHGRI NIH HHS R01 HG003827NHGRI NIH HHS R01HG003827NICHD NIH HHS R01 HD065122NICHD NIH HHS R01HD065122NIGMS NIH HHS R01 GM076360NIGMS NIH HHS R01GM076360-04S1
6 · The paper itself

Abstract

A biological state is equilibrium of multiple concurrent biomolecular reactions. The relative importance of these reactions depends on physiological temperature typically between 10 °C and 50 °C. Experimentally the temperature dependence of binding reaction constants reveals thermodynamics and thus details of these biomolecular processes. We developed a variable-temperature opto-fluidic system for real-time measurement of multiple (400-10,000) biomolecular binding reactions on solid supports from 10 °C to 60 °C within ±0.1 °C. We illustrate the performance of this system with investigation of binding reactions of plant lectins (carbohydrate-binding proteins) with 24 synthetic glycans (i.e., carbohydrates). We found that the lectin-glycan reactions in general can be enthalpy-driven, entropy-driven, or both, and water molecules play critical roles in the thermodynamics of these reactions.

Indexed as

Optical DevicesTemperatureModels, MolecularPlant LectinsPolysaccharidesProtein BindingProtein ConformationThermodynamicsTime FactorsTitaniumPlant LectinsPolysaccharidesTitanium

Identifiers

PMID24289409
PMCPMC3838479

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.