Evidence map›Paper›PMID 24289193›Full record

ArticleJournal of proteome research2014

Untargeted LC-MS metabolomics of bronchoalveolar lavage fluid differentiates acute respiratory distress syndrome from health.

Charles R Evans, Alla Karnovsky, Melissa A Kovach, Theodore J Standiford, Charles F Burant, Kathleen A Stringer

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04552821 (Study of Biomarkers in Blood and Alveolar Lavage Fluid Samples of Sepsis Patients Complicated With Acute Respiratory Distress Syndrome), which is not on this map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04552821 unknown statusnot on this mapstarted 2020, after this paper: background citation

Study of Biomarkers in Blood and Alveolar Lavage Fluid Samples of Sepsis Patients Complicated With Acute Respiratory Distress Syndrome (ARDS)

TypeobservationalSponsorTianjin Nankai HospitalRan2020 to 2024Enrolled90ConditionsSepsis, Acute Respiratory Distress Syndrome
3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it, 148 citations in OpenAlex.

  1. Pooled it
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  19. Repeated exposure to eucalyptus wood smoke alters pulmonary gene and metabolic profiles in male Long-Evans rats.Toxicological sciences : an official journal of the Society of Toxicology · 2024
    Article
  20. Metabolic signatures of acute respiratory distress syndrome: COVID versus non-COVID.American journal of physiology. Lung cellular and molecular physiology · 2024
    Review

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Charles R EvansDepartment of Internal Medicine, University of Michigan School of Medicine , Ann Arbor, Michigan, United States.
Alla Karnovsky
Melissa A Kovach
Theodore J Standiford
Charles F Burant
Kathleen A Stringer
University of Michigan–Ann Arbor · USMichigan United · USWashtenaw Community College · US

Funding

Pilot and Feasibility (P and F) ProgramP30DK089503 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Jeffrey F Horowitz · 2010 to 2026
$20.3M
PULMONARY CELLULAR AND MOLECULAR BIOLOGY TRAININGT32HL007749 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Robert Pickett Dickson · 1993 to 2026
$19.9M
SCCOR in Translational Research in Acute Lung InjuryP50HL074024 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HYZY, ROBERT C · 2003 to 2007
$13.5M
Statistics and Bioinformatics Core - WangU24DK097153 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BURANT, CHARLES F · 2012 to 2017
$10.1M
Metabolic flux in a model of reduced oxidative capacityK25DK092558 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI EVANS, CHARLES ROBERT · 2011 to 2015
$700k
Contribution of IL36 Family Members to Lung ImmunityK08HL121089 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KOVACH, MELISSA ANN · 2014 to 2016
$305k
Adrenergic activation of NHE requires PLD in CCL39 cellsR15HL074924 · NHLBI · MINNESOTA STATE UNIVERSITY MOORHEAD · PI PROVOST, JOSEPH JOHN · 2004 to 2006
$213k
NHLBI NIH HHS K08 HL121089NHLBI NIH HHS P50 HL074024NHLBI NIH HHS P50HL074924NHLBI NIH HHS R15 HL074924NHLBI NIH HHS T32 HL007749NIDDK NIH HHS DK097153NIDDK NIH HHS K25 DK092558NIDDK NIH HHS P30 DK089503NIDDK NIH HHS U24 DK097153
6 · The paper itself

Abstract

Acute respiratory distress syndrome (ARDS) remains a significant hazard to human health and is clinically challenging because there are no prognostic biomarkers and no effective pharmacotherapy. The lung compartment metabolome may detail the status of the local environment that could be useful in ARDS biomarker discovery and the identification of drug target opportunities. However, neither the utility of bronchoalveolar lavage fluid (BALF) as a biofluid for metabolomics nor the optimal analytical platform for metabolite identification is established. To address this, we undertook a study to compare metabolites in BALF samples from patients with ARDS and healthy controls using a newly developed liquid chromatography (LC)-mass spectroscopy (MS) platform for untargeted metabolomics. Following initial testing of three different high-performance liquid chromatography (HPLC) columns, we determined that reversed phase (RP)-LC and hydrophilic interaction chromatography (HILIC) were the most informative chromatographic methods because they yielded the most and highest quality data. Following confirmation of metabolite identification, statistical analysis resulted in 37 differentiating metabolites in the BALF of ARDS compared with health across both analytical platforms. Pathway analysis revealed networks associated with amino acid metabolism, glycolysis and gluconeogenesis, fatty acid biosynthesis, phospholipids, and purine metabolism in the ARDS BALF. The complementary analytical platforms of RPLC and HILIC-LC generated informative, insightful metabolomics data of the ARDS lung environment.

Indexed as

Bronchoalveolar Lavage FluidMetabolomicsBiomarkersCase-Control StudiesChromatography, LiquidElectrophoresis, Polyacrylamide GelHumansMass SpectrometryRespiratory Distress SyndromeBiomarkers

Identifiers

PMID24289193
PMCPMC4068805
OpenAlexW2011479207

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.