ArticleNucleic acids research2014
Recent updates and developments to plant genome size databases.
Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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20 citing papers in PubMed.
- Insights into the Genomic Background of Nine Common Chinese Medicinal Plants by Flow Cytometry and Genome Survey.Plants (Basel, Switzerland) · 2024Article
- Annotated genome sequence of a fast-growing diploid clone of red alder (Alnus rubra Bong.).G3 (Bethesda, Md.) · 2023Article
- Nettle, a Long-Known Fiber Plant with New Perspectives.Materials (Basel, Switzerland) · 2022Review
- Entailing the Next-Generation Sequencing and Metabolome for Sustainable Agriculture by Improving Plant Tolerance.International journal of molecular sciences · 2022Review
- Molecular Study of Selected Taxonomically Critical Taxa of the GenusPlants (Basel, Switzerland) · 2020Article
- Genomic Survey, Transcriptome, and Metabolome Analysis ofMetabolites · 2019Article
- An empirical assessment of a single family-wide hybrid capture locus set at multiple evolutionary timescales in Asteraceae.Applications in plant sciences · 2019Article
- Progress in the study of genome size evolution in Asteraceae: analysis of the last update.Database : the journal of biological databases and curation · 2019Article
- Understanding the Complexity of Cold Tolerance in White Clover using Temperature Gradient Locations and a GWAS Approach.The plant genome · 2018Article
- Review
- Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce.Nature communications · 2017Article
- Breaking RAD: an evaluation of the utility of restriction site-associated DNA sequencing for genome scans of adaptation.Molecular ecology resources · 2017Article
- The Cerrado (Brazil) plant cytogenetics database.Comparative cytogenetics · 2017Article
- Useful parasites: the evolutionary biology and biotechnology applications of transposable elements.Journal of genetics · 2016Review
- Are We There Yet? Reliably Estimating the Completeness of Plant Genome Sequences.The Plant cell · 2016Article
- Early genome duplications in conifers and other seed plants.Science advances · 2015Article
- What's in a genome? The C-value enigma and the evolution of eukaryotic genome content.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015Article
- The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa.BMC plant biology · 2015Article
- Between two fern genomes.GigaScience · 2014Review
- A proposal for a multivariate quantitative approach to infer karyological relationships among taxa.Comparative cytogenetics · 2014Article
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15 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Two plant genome size databases have been recently updated and/or extended: the Plant DNA C-values database (http://data.kew.org/cvalues), and GSAD, the Genome Size in Asteraceae database (http://www.asteraceaegenomesize.com). While the first provides information on nuclear DNA contents across land plants and some algal groups, the second is focused on one of the largest and most economically important angiosperm families, Asteraceae. Genome size data have numerous applications: they can be used in comparative studies on genome evolution, or as a tool to appraise the cost of whole-genome sequencing programs. The growing interest in genome size and increasing rate of data accumulation has necessitated the continued update of these databases. Currently, the Plant DNA C-values database (Release 6.0, Dec. 2012) contains data for 8510 species, while GSAD has 1219 species (Release 2.0, June 2013), representing increases of 17 and 51%, respectively, in the number of species with genome size data, compared with previous releases. Here we provide overviews of the most recent releases of each database, and outline new features of GSAD. The latter include (i) a tool to visually compare genome size data between species, (ii) the option to export data and (iii) a webpage containing information about flow cytometry protocols.
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