Evidence map›Paper›PMID 24288338›Full record

ArticleScience (New York, N.Y.)2013

The innate growth bistability and fitness landscapes of antibiotic-resistant bacteria.

J Barrett Deris, Minsu Kim, Zhongge Zhang, Hiroyuki Okano, Rutger Hermsen, Alexander Groisman, Terence Hwa

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 217 citations in OpenAlex.

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  10. Habitat fragmentation enhances microbial collective defence.Journal of the Royal Society, Interface · 2025
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48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

J Barrett DerisDepartment of Physics, University of California at San Diego, La Jolla, CA 92093-0374, USA.
Minsu Kim
Zhongge Zhang
Hiroyuki Okano
Rutger Hermsen
Alexander Groisman
Terence Hwa
University of California San Diego · US

Funding

TRANS_NETWORK PROJECTSU54CA143803 · NCI · PRINCETON UNIVERSITY · PI TLSTY, THEA D · 2009 to 2013
$14.2M
Quantitative Studies of Bacterial Growth PhysiologyR01GM095903 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HWA, TERENCE · 2011 to 2023
$3.8M
NCI NIH HHS 1 U54 CA143803NCI NIH HHS U54 CA143803NIGMS NIH HHS R01 GM095903NIGMS NIH HHS R01-GM095903
6 · The paper itself

Abstract

To predict the emergence of antibiotic resistance, quantitative relations must be established between the fitness of drug-resistant organisms and the molecular mechanisms conferring resistance. These relations are often unknown and may depend on the state of bacterial growth. To bridge this gap, we have investigated Escherichia coli strains expressing resistance to translation-inhibiting antibiotics. We show that resistance expression and drug inhibition are linked in a positive feedback loop arising from an innate, global effect of drug-inhibited growth on gene expression. A quantitative model of bacterial growth based on this innate feedback accurately predicts the rich phenomena observed: a plateau-shaped fitness landscape, with an abrupt drop in the growth rates of cultures at a threshold drug concentration, and the coexistence of growing and nongrowing populations, that is, growth bistability, below the threshold.

Indexed as

Adaptation, PhysiologicalDrug Resistance, BacterialGenetic FitnessChloramphenicolChloramphenicol O-AcetyltransferaseEscherichia coliGene Expression Regulation, BacterialModels, BiologicalProtein BiosynthesisProtein Synthesis InhibitorsChloramphenicolChloramphenicol O-AcetyltransferaseProtein Synthesis Inhibitors

Identifiers

PMID24288338
PMCPMC4059556
OpenAlexW1973943921

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.