Evidence map›Paper›PMID 24285300›Full record

ArticleNucleic acids research2014

The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse.

Judith A Blake, Carol J Bult, Janan T Eppig, James A Kadin, Joel E Richardson, Mouse Genome Database Group

Abstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 151 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
151citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

151 citing papers in PubMed, 4 syntheses or guidelines pooled it.

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91 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Judith A BlakeBioinformatics and Computational Biology, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.
Carol J Bult
Janan T Eppig
James A Kadin
Joel E Richardson
Mouse Genome Database Group

Funding

SOFTWARE AND DATABASE SYSTEM DEVELOPMENTP41HG000330 · NHGRI · JACKSON LABORATORY · PI EPPIG, JANAN T. · 1995 to 2010
$72.1M
Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Jeffrey Hsu-Min Chuang · 1985 to 2026
$61.9M
Mouse Genome DatabaseU41HG000330 · NHGRI · JACKSON LABORATORY · PI BLAKE, JUDITH A, BULT, CAROL J · 2011 to 2020
$45.5M
CRE Driver Strain ResourcesR24OD011190 · OD · JACKSON LABORATORY · PI MURRAY, STEPHEN A, SMITH, CYNTHIA LOUISE · 2012 to 2022
$7.9M
MULTI-LEVEL ANALYSIS AND DISPLAY OF MOUSE GENOME DATAP01HG000330 · NHGRI · JACKSON LABORATORY · PI EPPIG, JANAN T. · 1990 to 1994
–
NCI NIH HHS P30 CA034196NHGRI NIH HHS HG000330NHGRI NIH HHS U41 HG000330NIH HHS OD011190
6 · The paper itself

Abstract

The Mouse Genome Database (MGD) (http://www.informatics.jax.org) is the community model organism database resource for the laboratory mouse, a premier animal model for the study of genetic and genomic systems relevant to human biology and disease. MGD maintains a comprehensive catalog of genes, functional RNAs and other genome features as well as heritable phenotypes and quantitative trait loci. The genome feature catalog is generated by the integration of computational and manual genome annotations generated by NCBI, Ensembl and Vega/HAVANA. MGD curates and maintains the comprehensive listing of functional annotations for mouse genes using the Gene Ontology, and MGD curates and integrates comprehensive phenotype annotations including associations of mouse models with human diseases. Recent improvements include integration of the latest mouse genome build (GRCm38), improved access to comparative and functional annotations for mouse genes with expanded representation of comparative vertebrate genomes and new loads of phenotype data from high-throughput phenotyping projects. All MGD resources are freely available to the research community.

Indexed as

Databases, GeneticGenomeAnimalsGenomicsHumansInternetMiceMolecular Sequence AnnotationPhenotypeQuantitative Trait LociRats

Identifiers

PMID24285300
PMCPMC3964950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.