Evidence map›Paper›PMID 24284785›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2014

Dynamic changes in ribosome-associated proteome and phosphoproteome during deoxynivalenol-induced translation inhibition and ribotoxic stress.

Xiao Pan, Douglas A Whitten, Curtis G Wilkerson, James J Pestka

Open access · bronzeAbstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 41 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Xiao Pan* Department of Biochemistry and Molecular Biology;
Douglas A Whitten
Curtis G Wilkerson
James J Pestka
Michigan State University · USDigital Proteomics (United States) · USLaboratoire d’immunologie intégrative du cancer · FR

Funding

Trichothecene Toxicity and the Ribotoxic Stress ResponseR01ES003358 · NIEHS · MICHIGAN STATE UNIVERSITY · PI PESTKA, JAMES J · 1985 to 2012
$3.3M
Mechanisms of Trichothecene ToxicityR56ES003358 · NIEHS · MICHIGAN STATE UNIVERSITY · PI PESTKA, JAMES J · 2005 to 2005
$113k
NIEHS NIH HHS ES003358
6 · The paper itself

Abstract

Deoxynivalenol (DON), a trichothecene mycotoxin produced by Fusarium that commonly contaminates cereal-based food, interacts with the ribosome to cause translation inhibition and activate stress kinases in mononuclear phagocytes via the ribotoxic stress response (RSR). The goal of this study was to test the hypothesis that the ribosome functions as a platform for spatiotemporal regulation of translation inhibition and RSR. Specifically, we employed stable isotope labeling of amino acids in cell culture (SILAC)-based proteomics to quantify the early (≤ 30 min) DON-induced changes in ribosome-associated proteins in RAW 264.7 murine macrophage. Changes in the proteome and phosphoproteome were determined using off-gel isoelectric focusing and titanium dioxide chromatography, respectively, in conjunction with LC-MS/MS. Following exposure of RAW 264.7 to a toxicologically relevant concentration of DON (250 ng/ml), we observed an overall decrease in translation-related proteins interacting with the ribosome, concurrently with a compensatory increase in proteins that mediate protein folding, biosynthesis, and cellular organization. Alterations in the ribosome-associated phosphoproteome reflected proteins that modulate translational and transcriptional regulation, and others that converged with signaling pathways known to overlap with phosphorylation changes characterized previously in intact RAW 264.7 cells. These results suggest that the ribosome plays a central role as a hub for association and phosphorylation of proteins involved in the coordination of early translation inhibition as well as recruitment and maintenance of stress-related proteins-both of which enable cells to adapt and respond to ribotoxin exposure. This study provides a template for elucidating the molecular mechanisms of DON and other ribosome-targeting agents.

Indexed as

AnimalsCell LineGene OntologyKineticsMicePhosphoproteinsPhosphorylationProtein BiosynthesisProteomeRibosomal ProteinsRibosomesStress, PhysiologicalTrichothecenesdeoxynivalenolPhosphoproteinsProteomeRibosomal ProteinsTrichothecenesdeoxynivalenolproteomics.ribosomeribotoxic stress responsetranslation

Identifiers

PMID24284785
PMCPMC3930362
OpenAlexW2106435800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.