Evidence map›Paper›PMID 24284208›Full record

ArticleDevelopment (Cambridge, England)2014

Adaptation of the length scale and amplitude of the Bicoid gradient profile to achieve robust patterning in abnormally large Drosophila melanogaster embryos.

David Cheung, Cecelia Miles, Martin Kreitman, Jun Ma

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. The many bits of positional information.Development (Cambridge, England) · 2021
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Two-Exponential Models of Gene Expression Patterns for Noisy Experimental Data.Journal of computational biology : a journal of computational molecular cell biology · 2018
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Critical waves and the length problem of biology.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. Intracellular Scaling Mechanisms.Cold Spring Harbor perspectives in biology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

David CheungDivision of Biomedical Informatics, Cincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.
Cecelia Miles
Martin Kreitman
Jun Ma

Funding

Evolution of Canalizing Mechanisms in Gene ExpressionR01GM078381 · NIGMS · UNIVERSITY OF CHICAGO · PI KREITMAN, MARTIN E · 2007 to 2010
$1.8M
Regulation and Scaling of a Morphogen GradientR01GM101373 · NIGMS · CINCINNATI CHILDRENS HOSP MED CTR · PI MA, JUN · 2012 to 2015
$1.2M
NIGMS NIH HHS R01 GM078381NIGMS NIH HHS R01GM078381NIGMS NIH HHS R01 GM101373NIGMS NIH HHS R01GM101373
6 · The paper itself

Abstract

The formation of patterns that are proportional to the size of the embryo is an intriguing but poorly understood feature of development. Molecular mechanisms controlling such proportionality, or scaling, can be probed through quantitative interrogations of the properties of morphogen gradients that instruct patterning. Recent studies of the Drosophila morphogen gradient Bicoid (Bcd), which is required for anterior-posterior (AP) patterning in the early embryo, have uncovered two distinct ways of scaling. Whereas between-species scaling is achieved by adjusting the exponential shape characteristic of the Bcd gradient profile, namely, its length scale or length constant (λ), within-species scaling is achieved through adjusting the profile's amplitude, namely, the Bcd concentration at the anterior (B0). Here, we report a case in which Drosophila melanogaster embryos exhibit Bcd gradient properties uncharacteristic of their size. The embryos under investigation were from a pair of inbred lines that had been artificially selected for egg size extremes. We show that B0 in the large embryos is uncharacteristically low but λ is abnormally extended. Although the large embryos have more total bcd mRNA than their smaller counterparts, as expected, its distribution is unusually broad. We show that the large and small embryos develop gene expression patterns exhibiting boundaries that are proportional to their respective lengths. Our results suggest that the large-egg inbred line has acquired compensating properties that counteract the extreme length of the embryos to maintain Bcd gradient properties necessary for robust patterning. Our study documents, for the first time to our knowledge, a case of within-species Bcd scaling achieved through adjusting the gradient profile's exponential shape characteristic, illustrating at a molecular level how a developmental system can follow distinct operational paths towards the goal of robust and scaled patterning.

Indexed as

AnimalsBase SequenceBody PatterningDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianHomeodomain ProteinsSequence AlignmentSequence Analysis, DNATrans-Activatorsbcd protein, DrosophilaDrosophila ProteinsHomeodomain ProteinsTrans-ActivatorsBicoidCanalizationLength constantMorphogen gradientRobust patterningSize scaling

Identifiers

PMID24284208
PMCPMC3865754

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.