Evidence map›Paper›PMID 24279992›Full record

ArticleMicroscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada2014

Capturing enveloped viruses on affinity grids for downstream cryo-electron microscopy applications.

Gabriella Kiss, Xuemin Chen, Melinda A Brindley, Patricia Campbell, Claudio L Afonso, Zunlong Ke, Jens M Holl, Ricardo C Guerrero-Ferreira, Lauren A Byrd-Leotis, John Steel and 5 more

Abstract read
In one paragraph

Article in Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2018
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Gabriella KissDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
Xuemin ChenDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
Melinda A BrindleyCenter for Inflammation, Immunity & Infection, Georgia State University, Atlanta, GA 30303, USA.
Patricia CampbellDepartment of Microbiology and Immunology, School of Medicine, Emory University, Atlanta, GA 30322, USA.
Claudio L AfonsoUSDA, ARS, Southeast Poultry Research Laboratory, Athens, GA 30605, USA.
Zunlong KeSchool of Biology, Georgia Institute of Technology, Atlanta, GA 30332, USA.
Jens M HollDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
Ricardo C Guerrero-FerreiraDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
Lauren A Byrd-LeotisDepartment of Microbiology and Immunology, School of Medicine, Emory University, Atlanta, GA 30322, USA.
John SteelDepartment of Microbiology and Immunology, School of Medicine, Emory University, Atlanta, GA 30322, USA.
David A SteinhauerDepartment of Microbiology and Immunology, School of Medicine, Emory University, Atlanta, GA 30322, USA.
Richard K PlemperDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
Deborah F KellyVirginia Tech Carilion Research Institute, Roanoke, VA 24016, USA.
Paul W SpearmanDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.
Elizabeth R WrightDepartment of Pediatrics, School of Medicine, Division of Pediatric Infectious Diseases, Emory University, Children's Healthcare of Atlanta, Atlanta, GA 30322, USA.

Funding

Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Hannah LF Cooper · 2002 to 2026
$74.0M
Role of VPU in Retroviral Particle AssemblyR01AI058828 · NIAID · VANDERBILT UNIVERSITY · PI SPEARMAN, PAUL W. · 2004 to 2015
$3.6M
Cryo-Electron and Biochemical Anaysis of Native Paramyxovirus Fusion ComplexesR01AI083402 · NIAID · GEORGIA STATE UNIVERSITY · PI PLEMPER, RICHARD K. · 2011 to 2015
$1.7M
Structural studies of respiratory syncytial virusR21AI101775 · NIAID · EMORY UNIVERSITY · PI WRIGHT, ELIZABETH R · 2013 to 2014
$429k
Cryo-Electron and Biochemical Analysis of Native Paramyxovirus Fusion ComplexesR56AI083402 · NIAID · EMORY UNIVERSITY · PI PLEMPER, RICHARD K. · 2010 to 2010
$380k
NIAID NIH HHS AI058828NIAID NIH HHS AI083402NIAID NIH HHS AI101775NIAID NIH HHS HHSN266200700006CNIAID NIH HHS P30 AI050409NIAID NIH HHS R01 AI058828NIAID NIH HHS R01 AI083402NIAID NIH HHS R21 AI101775NIAID NIH HHS R56 AI083402
6 · The paper itself

Abstract

Electron microscopy (EM), cryo-electron microscopy (cryo-EM), and cryo-electron tomography (cryo-ET) are essential techniques used for characterizing basic virus morphology and determining the three-dimensional structure of viruses. Enveloped viruses, which contain an outer lipoprotein coat, constitute the largest group of pathogenic viruses to humans. The purification of enveloped viruses from cell culture presents certain challenges. Specifically, the inclusion of host-membrane-derived vesicles, the complete destruction of the viruses, and the disruption of the internal architecture of individual virus particles. Here, we present a strategy for capturing enveloped viruses on affinity grids (AG) for use in both conventional EM and cryo-EM/ET applications. We examined the utility of AG for the selective capture of human immunodeficiency virus virus-like particles, influenza A, and measles virus. We applied nickel-nitrilotriacetic acid lipid layers in combination with molecular adaptors to selectively adhere the viruses to the AG surface. This further development of the AG method may prove essential for the gentle and selective purification of enveloped viruses directly onto EM grids for ultrastructural analyses.

Indexed as

Cryoelectron MicroscopyNitrilotriacetic AcidOrganometallic CompoundsVirionVirusesnickel nitrilotriacetic acidNitrilotriacetic AcidOrganometallic Compounds

Identifiers

PMID24279992
PMCPMC4073796

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.