Evidence map›Paper›PMID 24278120›Full record

ArticlePloS one2013

Cytokines and tumor metastasis gene variants in oral cancer and precancer in Puerto Rico.

Esther Erdei, Li Luo, Huiping Sheng, Erika Maestas, Kirsten A M White, Amanda Mackey, Yan Dong, Marianne Berwick, Douglas E Morse

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Interaction of tobacco chewing and smoking habit with interleukin 6 promoter polymorphism in oral precancerous lesions and oral cancer.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2021
    Article
  7. Review
  8. Wound healing genes and susceptibility to cutaneous leishmaniasis in Brazil: role of COL1A1.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2015
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Esther ErdeiMolecular Epidemiology Laboratory, Division of Epidemiology and Biostatistics, Department of Internal Medicine, University of New Mexico Health Sciences Center, School of Medicine, Albuquerque, New Mexico, United States of America ; University of New Mexico Cancer Center, Cancer Epidemiology and Cancer Prevention Program, University of New Mexico Health Sciences Center, Albuquerque, New Mexico, United States of America.
Li Luo
Huiping Sheng
Erika Maestas
Kirsten A M White
Amanda Mackey
Yan Dong
Marianne Berwick
Douglas E Morse
UNM Comprehensive Cancer CenterCorewell Health Blodgett Hospital · USNew Mexico Cancer Center · USNew York University · USPrinceton University · USUniversity of New Mexico · US

Funding

WOMEN'S CANCERS RESEARCH PROGRAMP30CA118100 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Yolanda Sanchez · 2005 to 2026
$57.1M
RISK OF ORAL EPITHELIAL DYSPLASIA IN PUERTO RICOU54DE014257 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MORSE, DOUGLAS E · 2001 to 2007
$7.3M
NCI NIH HHS P30 CA118100NIDCR NIH HHS 5U54DE014257-06NIDCR NIH HHS U54 DE014257
6 · The paper itself

Abstract

objectivesA cross-sectional epidemiological study explored genetic susceptibility to oral precancer and cancer in Puerto Rico (PR). MATERIALS AND

methodsThree hundred three individuals with a benign oral condition, oral precancer (oral epithelial hyperplasia/hyperkeratosis, oral epithelial dysplasia), or oral squamous cell carcinoma (SCCA) were identified via PR pathology laboratories. A standardized, structured questionnaire obtained information on epidemiological variables; buccal cells were collected for genetic analysis. Genotyping was performed using Taqman® assays. Allelic frequencies of single nucleotide polymorphisms (SNPs) were evaluated in cytokine genes and genes influencing tumor metastasis. Risk estimates for a diagnosis of oral precancer or SCCA while having a variant allele were generated using logistic regression. Adjusted models controlled for age, gender, ancestry, education, smoking and alcohol consumption.

resultsRelative to persons with a benign oral lesion, individuals with homozygous recessive allelic variants of tumor necrosis factor (TNF-α) -238 A/G SNP had a reduced odds of having an oral precancer (ORadjusted = 0.15; 95% CI 0.03-0.70). The transforming growth factor beta-1 (TGFβ-1 -509 C/T) polymorphism was inversely associated with having an oral SCCA among persons homozygous for the recessive variant (ORcrude = 0.27; 95% CI 0.09-0.79). The matrix metalloproteinase gene (MMP-1) variant, rs5854, was associated with oral SCCA; participants with even one variant allele were more likely to have oral SCCA (ORadjusted = 2.62, 95% CI 1.05-6.53) compared to people with ancestral alleles.

conclusionOur exploratory analyses suggest that genetic alterations in immune system genes and genes with metastatic potential are associated with oral precancer and SCCA risk in PR.

Indexed as

AdultAgedFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansInterleukin-10Interleukin-1betaLogistic ModelsMaleMiddle AgedMouth MucosaMouth NeoplasmsPolymorphism, Single NucleotidePuerto RicoInterleukin-10Interleukin-1beta

Identifiers

PMID24278120
PMCPMC3835869
OpenAlexW1973490950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.