Evidence map›Paper›PMID 24277043›Full record

ArticleAntimicrobial agents and chemotherapy2014

Identification of 50 class D β-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp.

Bruno Périchon, Sylvie Goussard, Violaine Walewski, Lenka Krizova, Gustavo Cerqueira, Cheryl Murphy, Michael Feldgarden, Jennifer Wortman, Dominique Clermont, Alexandr Nemec and 1 more

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Deciphering the genomic landscape of novelFrontiers in microbiology · 2026
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  2. Review
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  4. Article
  5. History of the taxonomy ofInternational journal of systematic and evolutionary microbiology · 2025
    Article
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  7. Article
  8. Article
  9. Frontiers in microbiology · 2024
    Article
  10. Article
  11. Article
  12. Class C β-Lactamases: Molecular Characteristics.Clinical microbiology reviews · 2022
    Review
  13. Review
  14. Article
  15. Antimicrobial Resistance Genes in ESBL-ProducingAntibiotics (Basel, Switzerland) · 2021
    Article
  16. Article
  17. Emerging Strategies to Combat β-Lactamase Producing ESKAPE Pathogens.International journal of molecular sciences · 2020
    Review
  18. Mechanisms ProtectingInternational journal of molecular sciences · 2020
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Bruno PérichonInstitut Pasteur, Unité des Agents Antibactériens, Paris, France.
Sylvie Goussard
Violaine Walewski
Lenka Krizova
Gustavo Cerqueira
Cheryl Murphy
Michael Feldgarden
Jennifer Wortman
Dominique Clermont
Alexandr Nemec
Patrice Courvalin

Funding

NIAID NIH HHS HHSN272200900018C
6 · The paper itself

Abstract

Whole-genome sequencing of a collection of 103 Acinetobacter strains belonging to 22 validly named species and another 16 putative species allowed detection of genes for 50 new class D β-lactamases and 65 new Acinetobacter-derived cephalosporinases (ADC). All oxacillinases (OXA) contained the three typical motifs of class D β-lactamases, STFK, (F/Y)GN, and K(S/T)G. The phylogenetic tree drawn from the OXA sequences led to an increase in the number of OXA groups from 7 to 18. The topologies of the OXA and RpoB phylogenetic trees were similar, supporting the ancient acquisition of blaOXA genes by Acinetobacter species. The class D β-lactamase genes appeared to be intrinsic to several species, such as Acinetobacter baumannii, Acinetobacter pittii, Acinetobacter calcoaceticus, and Acinetobacter lwoffii. Neither blaOXA-40/143- nor blaOXA-58-like genes were detected, and their origin remains therefore unknown. The phylogenetic tree analysis based on the alignment of the sequences deduced from blaADC revealed five main clusters, one containing ADC belonging to species closely related to A. baumannii and the others composed of cephalosporinases from the remaining species. No indication of blaOXA or blaADC transfer was observed between distantly related species, except for blaOXA-279, possibly transferred from Acinetobacter genomic species 6 to Acinetobacter parvus. Analysis of β-lactam susceptibility of seven strains harboring new oxacillinases and cloning of the corresponding genes in Escherichia coli and in a susceptible A. baumannii strain indicated very weak hydrolysis of carbapenems. Overall, this study reveals a large pool of β-lactamases in different Acinetobacter spp., potentially transferable to pathogenic strains of the genus.

Indexed as

PhylogenyAcinetobacterAmino Acid MotifsAnti-Bacterial Agentsbeta-LactamsCephalosporinaseEscherichia coliGene ExpressionMolecular Sequence DataPlasmidsRecombinant ProteinsSequence AlignmentAnti-Bacterial Agentsbeta-LactamsCephalosporinaseRecombinant Proteins

Identifiers

PMID24277043
PMCPMC3910822

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.