Evidence map›Paper›PMID 24275196›Full record

ArticleBrain research2014

Expression of the CHOP-inducible carbonic anhydrase CAVI-b is required for BDNF-mediated protection from hypoxia.

Tori A Matthews, Allyssa Abel, Chris Demme, Teresa Sherman, Pei-wen Pan, Marc W Halterman, Seppo Parkkila, Keith Nehrke

Abstract read
In one paragraph

Article in Brain research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Carbonic anhydrase activation profile of indole-based derivatives.Journal of enzyme inhibition and medicinal chemistry · 2021
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Tori A MatthewsDepartment of Medicine, University of Rochester Medical Center, Rochester, NY, USA.
Allyssa AbelUndergraduate Program in Neuroscience, University of Rochester, Rochester, NY, USA.
Chris DemmeUndergraduate Program in Cell and Developmental Biology, University of Rochester, Rochester, NY, USA.
Teresa ShermanDepartment of Medicine, University of Rochester Medical Center, Rochester, NY, USA.
Pei-wen PanInstitute of Biomedical Technology and School of Medicine, University of Tampere, Tampere, Finland.
Marc W HaltermanDepartment of Neurology, University of Rochester Medical Center, Rochester, NY, USA.
Seppo ParkkilaInstitute of Biomedical Technology and School of Medicine, University of Tampere, Tampere, Finland.
Keith NehrkeDepartment of Medicine, University of Rochester Medical Center, Rochester, NY, USA; Department of Pharmacology and Physiology, University of Rochester Medical Center, Rochester, NY, USA. Electronic address: keith_nehrke@urmc.rochester.edu.
University of Rochester Medical Center · USTampere University · FIUniversity of Rochester · US

Funding

Neuroprotection by a Nuclear Carbonic Anhydrase in C. elegansR01NS064945 · NINDS · UNIVERSITY OF ROCHESTER · PI NEHRKE, KEITH · 2010 to 2014
$1.6M
NINDS NIH HHS R01 NS064945NINDS NIH HHS R01NS064945
6 · The paper itself

Abstract

Carbonic anhydrases (CAs) comprise a family of zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide. CAs contribute to a myriad of physiological processes, including pH regulation, anion transport and water balance. To date, 16 known members of the mammalian alpha-CA family have been identified. Given that the catalytic family members share identical reaction chemistry, their physiologic roles are influenced greatly by their tissue and sub-cellular locations. CAVI is the lone secreted CA and exists in both saliva and the gastrointestinal mucosa. An alternative, stress-inducible isoform of CAVI (CAVI-b) has been shown to be expressed from a cryptic promoter that is activated by the CCAAT/Enhancer-Binding Protein Homologous Protein (CHOP). The CAVI-b isoform is not secreted and is currently of unknown physiological function. Here we use neuronal models, including a model derived using Car6 and CHOP gene ablations, to delineate a role for CAVI-b in ischemic protection. Our results demonstrate that CAVI-b expression, which is increased through CHOP-signaling in response to unfolded protein stress, is also increased by oxygen-glucose deprivation (OGD). While enforced expression of CAVI-b is not sufficient to protect against ischemia, CHOP regulation of CAVI-b is necessary for adaptive changes mediated by BDNF that reduce subsequent ischemic damage. These results suggest that CAVI-b comprises a necessary component of a larger adaptive signaling pathway downstream of CHOP.

Indexed as

Analysis of VarianceAnimalsBrain-Derived Neurotrophic FactorCarbonic AnhydrasesCell DifferentiationCell HypoxiaCells, CulturedEmbryo, MammalianGene Expression RegulationGlucoseL-Lactate DehydrogenaseMesencephalonMiceMice, Inbred C57BLMice, KnockoutNeural Stem CellsBrain-Derived Neurotrophic FactorCarbonic Anhydrasescarbonic anhydrase VIDdit3 protein, mouseGlucoseL-Lactate DehydrogenaseProtein IsoformsTranscription Factor CHOPBrain-derived neurotrophic factor (BDNF)Carbonic anhydraseIschemiaNeurosphereOxygen glucose deprivation (OGD)Unfolded protein response (UPR)

Identifiers

PMID24275196
PMCPMC3888505
OpenAlexW2163220936

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.