Evidence map›Paper›PMID 24269800›Full record

ArticleNeuroImage2014

SGPP: spatial Gaussian predictive process models for neuroimaging data.

Jung Won Hyun, Yimei Li, John H Gilmore, Zhaohua Lu, Martin Styner, Hongtu Zhu

Open access · greenAbstract read
In one paragraph

Article in NeuroImage, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  4. Review
  5. Bayesian Spatial Blind Source Separation via the Thresholded Gaussian Process.Journal of the American Statistical Association · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jung Won HyunDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Yimei LiDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
John H GilmoreDepartment of Psychiatry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Zhaohua LuDepartment of Biostatistics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Biomedical Research Imaging Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Martin StynerDepartment of Psychiatry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Hongtu ZhuDepartment of Biostatistics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Biomedical Research Imaging Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. Electronic address: hzhu@bios.unc.edu.
University of North Carolina at Chapel Hill · USSt. Jude Children's Research Hospital · US

Funding

UNC CLINICAL AND TRANSLATIONAL SCIENCE AWARD: BPCAUL1RR025747 · NCRR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI RUNGE, MARSCHALL S. · 2008 to 2011
$44.6M
Washington University ConsoritumU54EB005149 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI KIKINIS, RON · 2004 to 2013
$39.3M
UNC MRDD Research CenterP30HD003110 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BELGER, AYSENIL · 1985 to 2012
$28.7M
Statistical Methods for Cancer Clinical TrialsP01CA142538 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DAVIDIAN, MARIE, KOSOROK, MICHAEL R · 2010 to 2019
$21.3M
Prospective study of the onset of schizophreniaP50MH064065 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2002 to 2011
$19.6M
Early Brain Development in TwinsR01MH070890 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2004 to 2014
$5.3M
Early Brain Development in One and Two Year OldsR01HD053000 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2007 to 2018
$4.4M
Early Brain Development in TwinsU01MH070890 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN HORACE · 2015 to 2019
$2.9M
Statistical Analysis of Biomedical Imaging Data in Curved SpaceR01MH086633 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI IBRAHIM, JOSEPH G · 2010 to 2018
$2.9M
Developmental Brain Atlas Tools and Data Applied to Humans and MacaquesR01MH091645 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NIETHAMMER, MARC, STYNER, MARTIN ANDREAS · 2010 to 2014
$2.1M
Nonparametric Bayes Methods for Biomedical StudiesR01ES017240 · NIEHS · DUKE UNIVERSITY · PI DUNSON, DAVID BRIAN · 2009 to 2013
$1.2M
PRENATAL INFECTION, BRAIN DEVELOPMENT AND SCHIZOPHRENIAR01MH060352 · NIMH · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI GILMORE, JOHN H · 2000 to 2003
$800k
Autism Speaks AS1499NCI NIH HHS P01 CA142538NCI NIH HHS P01CA142538-01NCRR NIH HHS RR025747-01NCRR NIH HHS UL1 RR025747NIA NIH HHS AG033387NIA NIH HHS R21 AG033387NIBIB NIH HHS U54 EB005149NICHD NIH HHS HD053000NICHD NIH HHS P30 HD003110NICHD NIH HHS P30 HD03110NICHD NIH HHS R01 HD053000NIEHS NIH HHS R01 ES017240NIEHS NIH HHS R01ES17240NIMH NIH HHS MH064065NIMH NIH HHS MH070890NIMH NIH HHS MH086633NIMH NIH HHS MH091645NIMH NIH HHS P50 MH064065NIMH NIH HHS R01 MH060352NIMH NIH HHS R01 MH070890NIMH NIH HHS R01 MH086633NIMH NIH HHS R01 MH091645NIMH NIH HHS U01 MH070890
6 · The paper itself

Abstract

The aim of this paper is to develop a spatial Gaussian predictive process (SGPP) framework for accurately predicting neuroimaging data by using a set of covariates of interest, such as age and diagnostic status, and an existing neuroimaging data set. To achieve a better prediction, we not only delineate spatial association between neuroimaging data and covariates, but also explicitly model spatial dependence in neuroimaging data. The SGPP model uses a functional principal component model to capture medium-to-long-range (or global) spatial dependence, while SGPP uses a multivariate simultaneous autoregressive model to capture short-range (or local) spatial dependence as well as cross-correlations of different imaging modalities. We propose a three-stage estimation procedure to simultaneously estimate varying regression coefficients across voxels and the global and local spatial dependence structures. Furthermore, we develop a predictive method to use the spatial correlations as well as the cross-correlations by employing a cokriging technique, which can be useful for the imputation of missing imaging data. Simulation studies and real data analysis are used to evaluate the prediction accuracy of SGPP and show that SGPP significantly outperforms several competing methods, such as voxel-wise linear model, in prediction. Although we focus on the morphometric variation of lateral ventricle surfaces in a clinical study of neurodevelopment, it is expected that SGPP is applicable to other imaging modalities and features.

Indexed as

Image Processing, Computer-AssistedNeuroimagingPrincipal Component AnalysisSpatial AnalysisComputer SimulationFemaleHumansInfantLateral VentriclesMaleNormal DistributionCokrigingFunctional principal component analysisMissing dataPredictionSimultaneous autoregressive modelSpatial Gaussian predictive process

Identifiers

PMID24269800
PMCPMC4134945
OpenAlexW2080515433

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.