Evidence map›Paper›PMID 24269540›Full record

ArticleBiochimica et biophysica acta2014

Mechanistic insights from functional characterization of an unnatural His37 mutant of the influenza A/M2 protein.

Alexei L Polishchuk, Lidia Cristian, Lawrence H Pinto, James D Lear, William F DeGrado

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. M2 proton channel: toward a model of a primitive proton pump.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2015
    Article
  2. Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexei L PolishchukDepartment of Biochemistry and Biophysics, The Robert Wood Johnson Foundation, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA 19104, USA.
Lidia CristianDepartment of Biochemistry and Biophysics, The Robert Wood Johnson Foundation, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA 19104, USA.
Lawrence H PintoDepartment of Neurobiology and Physiology, Northwestern University, Evanston, IL 60208, USA.
James D LearDepartment of Biochemistry and Biophysics, The Robert Wood Johnson Foundation, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA 19104, USA.
William F DeGradoDepartment of Biochemistry and Biophysics, The Robert Wood Johnson Foundation, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA 19104, USA. Electronic address: William.DeGrado@ucsf.edu.

Funding

Development of drugs that target the M2 proton channel from the influenza A VirusU01AI074571 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 2008 to 2012
$7.5M
Structure of M2 Proton Channel from Influenza A VirusR01GM056423 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 1997 to 2016
$4.5M
NIAID NIH HHS U01 AI074571NIGMS NIH HHS GM56423NIGMS NIH HHS R01 GM056423
6 · The paper itself

Abstract

The influenza A/M2 protein is a homotetrameric single-pass integral membrane protein encoded by the influenza A viral genome. Its transmembrane domain represents both a crucial drug target and a minimalistic model system for transmembrane proton transport and charge stabilization. Recent structural and functional studies of M2 have suggested that the proton transport mechanism involves sequential extraviral protonation and intraviral deprotonation of a highly conserved His37 side chain by the transported proton, consistent with a pH-activated proton shuttle mechanism. Multiple tautomeric forms of His can be formed, and it is not known whether they contribute to the mechanism of proton shuttling. Here we present the thermodynamic and functional characterization of an unnatural amino acid mutant at His37, where the imidazole side chain is substituted with a 4-thiazolyl group that is unable to undergo tautomerization and has a significantly lower solution pKa. The mutant construct has a similar stability to the wild-type protein at pH8 in bilayers and is virtually inactive at external pH7.4 in a semiquantitative liposome flux assay as expected from its lower sidechain pKa. However when the external buffer pH is lowered to 4.9 and 2.4, the mutant shows increasing amantadine sensitive flux of a similar magnitude to that of the wild type construct at pH7.4 and 4.9 respectively. These findings are in line with mechanistic hypotheses suggesting that proton flux through M2 is mediated by proton exchange from adjacent water molecules with the His37 sidechain, and that tautomerization is not required for proton translocation. This article is part of a Special Issue entitled: Viral Membrane Proteins - Channels for Cellular Networking.

Indexed as

Amino Acid SequenceHydrogen-Ion ConcentrationInfluenza A virusMolecular Sequence DataMutationThermodynamicsViral Matrix ProteinsViroporin ProteinsM2 protein, Influenza A virusViral Matrix ProteinsViroporin ProteinsHis37InfluenzaM2pK(a)ProtonTransport

Identifiers

PMID24269540
PMCPMC3943701

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.