Evidence map›Paper›PMID 24269240›Full record

ArticleBiochemical and biophysical research communications2014

ATP binding to two sites is necessary for dimerization of nucleotide-binding domains of ABC proteins.

Maria E Zoghbi, Guillermo A Altenberg

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Comparison of mechanistic transport cycle models of ABC exporters.Biochimica et biophysica acta. Biomembranes · 2018
    Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Maria E ZoghbiDepartment of Cell Physiology and Molecular Biophysics, Texas Tech University Health Sciences Center, Lubbock, TX 79430-6551, USA; Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX 79430-6551, USA. Electronic address: maria.zoghbi@ttuhsc.edu.
Guillermo A AltenbergDepartment of Cell Physiology and Molecular Biophysics, Texas Tech University Health Sciences Center, Lubbock, TX 79430-6551, USA; Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX 79430-6551, USA. Electronic address: g.altenberg@ttuhsc.edu.

Funding

Architecture of the transmembrane pore formed by connexin 43R01GM079629 · NIGMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI ALTENBERG, GUILLERMO A · 2007 to 2011
$1.7M
NIGMS NIH HHS 3R01GM079629-03S1NIGMS NIH HHS R01 GM079629NIGMS NIH HHS R01GM79629
6 · The paper itself

Abstract

ATP binding cassette (ABC) transporters have a functional unit formed by two transmembrane domains and two nucleotide binding domains (NBDs). ATP-bound NBDs dimerize in a head-to-tail arrangement, with two nucleotides sandwiched at the dimer interface. Both NBDs contribute residues to each of the two nucleotide-binding sites (NBSs) in the dimer. In previous studies, we showed that the prototypical NBD MJ0796 from Methanocaldococcus jannaschii forms ATP-bound dimers that dissociate completely following hydrolysis of one of the two bound ATP molecules. Since hydrolysis of ATP at one NBS is sufficient to drive dimer dissociation, it is unclear why all ABC proteins contain two NBSs. Here, we used luminescence resonance energy transfer (LRET) to study ATP-induced formation of NBD homodimers containing two NBSs competent for ATP binding, and NBD heterodimers with one active NBS and one binding-defective NBS. The results showed that binding of two ATP molecules is necessary for NBD dimerization. We conclude that ATP hydrolysis at one nucleotide-binding site drives NBD dissociation, but two binding sites are required to form the ATP-sandwich NBD dimer necessary for hydrolysis.

Indexed as

Protein MultimerizationAdenosine TriphosphateATP-Binding Cassette TransportersBinding SitesFluorescence Resonance Energy TransferHydrolysisMethanocaldococcusProtein BindingProtein Structure, TertiaryAdenosine TriphosphateATP-Binding Cassette Transporters8-azido-ATP-biotin8-N(3)ATP-2′,3′-biotin-long chain-hydrazideABCABC transporterATP-binding cassetteCys-less single-Trp mutant MJ0796-C53G-C128I-G174WDimerizationFluorescenceKineticsLRETluminescence (or lanthanide-based) resonance energy transferLuminescence resonance energy transferMJMJ-CLMJIMJ-K44AMJ-K44EMJ-S42FMJ-Y11Amutant based on MJ in which Lys44 was replaced with Alamutant based on MJ in which Lys44 was replaced with Glumutant based on MJ in which Ser42 was replaced with Phemutant based on MJ in which Tyr11 was replaced with AlaNBDNBSnucleotide-binding domainnucleotide-binding sitesingle-Cys mutant E171Q based on MJsingle-Cys mutant G14C based on MJ-CL

Identifiers

PMID24269240
PMCPMC3901029

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.