Evidence map›Paper›PMID 24266659›Full record

ArticleAssay and drug development technologies

Development and validation of fluorescence-based and automated patch clamp-based functional assays for the inward rectifier potassium channel Kir4.1.

Rene Raphemot, Rishin J Kadakia, Michelle L Olsen, Sreedatta Banerjee, Emily Days, Stephen S Smith, C David Weaver, Jerod S Denton

Open access · greenAbstract readEvaluation StudyValidation Study
In one paragraph

Article in Assay and drug development technologies. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. A selective inhibitor of the sperm-specific potassium channel SLO3 impairs human sperm function.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Rene Raphemot1 Department of Anesthesiology, Vanderbilt University School of Medicine , Nashville, Tennessee.
Rishin J Kadakia
Michelle L Olsen
Sreedatta Banerjee
Emily Days
Stephen S Smith
C David Weaver
Jerod S Denton
Vanderbilt University · USMolecular Devices (United Kingdom) · GBUniversity of Alabama at Birmingham · US

Funding

Epigenetic Regulation of Kir4.1 and GLT1 in PathophysiologyR01NS075062 · NINDS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI OLSEN, MICHELLE L · 2013 to 2017
$1.6M
Molecular pharmacology and physiology of kidney potassium transportR01DK082884 · NIDDK · VANDERBILT UNIVERSITY · PI DENTON, JEROD S. · 2010 to 2014
$1.3M
Chemical probes of the astroglial potassium channel Kir4.1R21NS073097 · NINDS · VANDERBILT UNIVERSITY · PI DENTON, JEROD S. · 2010 to 2012
$180k
NIDDK NIH HHS 1R01DK082884NINDS NIH HHS 1R21NS073097-01NINDS NIH HHS R01 NS075062
6 · The paper itself

Abstract

The inward rectifier potassium (Kir) channel Kir4.1 plays essential roles in modulation of neurotransmission and renal sodium transport and may represent a novel drug target for temporal lobe epilepsy and hypertension. The molecular pharmacology of Kir4.1 is limited to neurological drugs, such as fluoxetine (Prozac(©)), exhibiting weak and nonspecific activity toward the channel. The development of potent and selective small-molecule probes would provide critically needed tools for exploring the integrative physiology and therapeutic potential of Kir4.1. A fluorescence-based thallium (Tl(+)) flux assay that utilizes a tetracycline-inducible T-Rex-HEK293-Kir4.1 cell line to enable high-throughput screening (HTS) of small-molecule libraries was developed. The assay is dimethyl sulfoxide tolerant and exhibits robust screening statistics (Z'=0.75±0.06). A pilot screen of 3,655 small molecules and lipids revealed 16 Kir4.1 inhibitors (0.4% hit rate). 3,3-Diphenyl-N-(1-phenylethyl)propan-1-amine, termed VU717, inhibits Kir4.1-mediated thallium flux with an IC50 of ∼6 μM. An automated patch clamp assay using the IonFlux HT workbench was developed to facilitate compound characterization. Leak-subtracted ensemble "loose patch" recordings revealed robust tetracycline-inducible and Kir4.1 currents that were inhibited by fluoxetine (IC50=10 μM), VU717 (IC50=6 μM), and structurally related calcium channel blocker prenylamine (IC50=6 μM). Finally, we demonstrate that VU717 inhibits Kir4.1 channel activity in cultured rat astrocytes, providing proof-of-concept that the Tl(+) flux and IonFlux HT assays can enable the discovery of antagonists that are active against native Kir4.1 channels.

Indexed as

AnimalsAstrocytesCells, CulturedDrug Evaluation, PreclinicalFlow CytometryFlow Injection AnalysisHEK293 CellsHumansIon Channel GatingKcnj10 ChannelPatch-Clamp TechniquesPotassium Channel BlockersPotassium Channels, Inwardly RectifyingRatsRats, Sprague-DawleySpectrometry, FluorescenceKcnj10 ChannelPotassium Channel BlockersPotassium Channels, Inwardly Rectifying

Identifiers

PMID24266659
PMCPMC3870600
OpenAlexW1759764844

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.