ReviewBioMed research international2013
Microbial diversity in the era of omic technologies.
Review in BioMed research international, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
17 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Microbiome of the paranasal sinuses: Update and literature review.American journal of rhinology & allergyPooled it
- The tumor microbiome in cancer progression: mechanisms and therapeutic potential.Molecular cancer · 2025Review
- Analysis of the Gut Bacterial Community of Wild Larvae ofFrontiers in microbiology · 2022Article
- Article
- Exploitation of Potential Extremophiles for Bioremediation of Xenobiotics Compounds: A Biotechnological Approach.Current genomics · 2020Review
- Lab to Field Assessment of the Ecotoxicological Impact of Chlorpyrifos, Isoproturon, or Tebuconazole on the Diversity and Composition of the Soil Bacterial Community.Frontiers in microbiology · 2018Article
- A multiplex real-time PCR panel assay for simultaneous detection and differentiation of 12 common swine viruses.Journal of virological methods · 2016Article
- Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms.Nucleic acids research · 2016Review
- Bacterial community associated to the pine wilt disease insect vectors Monochamus galloprovincialis and Monochamus alternatus.Scientific reports · 2016Article
- Response and resilience of soil microbial communities inhabiting in edible oil stress/contamination from industrial estates.BMC microbiology · 2016Article
- Inflammaging and cancer: a challenge for the Mediterranean diet.Nutrients · 2015Review
- Synergisms between microbial pathogens in plant disease complexes: a growing trend.Frontiers in plant science · 2015Review
- Perspective for Aquaponic Systems: "Omic" Technologies for Microbial Community Analysis.BioMed research international · 2015Review
- Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity.Frontiers in microbiology · 2015Review
- The nasal and sinus microbiome in health and disease.Current allergy and asthma reports · 2014Review
- Functional gene arrays-based analysis of fecal microbiomes in patients with liver cirrhosis.BMC genomics · 2014Article
- Specific genomic fingerprints of phosphate solubilizing Pseudomonas strains generated by BOX elements.BioMed research international · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Human life and activity depends on microorganisms, as they are responsible for providing basic elements of life. Although microbes have such a key role in sustaining basic functions for all living organisms, very little is known about their biology since only a small fraction (average 1%) can be cultured under laboratory conditions. This is even more evident when considering that >88% of all bacterial isolates belong to four bacterial phyla, the Proteobacteria, Firmicutes, Actinobacteria, and Bacteroidetes. Advanced technologies, developed in the last years, promise to revolutionise the way that we characterize, identify, and study microbial communities. In this review, we present the most advanced tools that microbial ecologists can use for the study of microbial communities. Innovative microbial ecological DNA microarrays such as PhyloChip and GeoChip that have been developed for investigating the composition and function of microbial communities are presented, along with an overview of the next generation sequencing technologies. Finally, the Single Cell Genomics approach, which can be used for obtaining genomes from uncultured phyla, is outlined. This tool enables the amplification and sequencing of DNA from single cells obtained directly from environmental samples and is promising to revolutionise microbiology.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.