Evidence map›Paper›PMID 24260494›Full record

ArticlePloS one2013

Imaging of mRNA-protein interactions in live cells using novel mCherry trimolecular fluorescence complementation systems.

Juan Yin, Duanhao Zhu, Zhiping Zhang, Wei Wang, Jinyu Fan, Dong Men, Jiaoyu Deng, Hongping Wei, Xian-En Zhang, Zongqiang Cui

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

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  10. Aptamers in analytics.The Analyst · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Juan YinState Key Laboratory of Virology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, China ; Graduate University of Chinese Academy of Sciences, Beijing, China.
Duanhao Zhu
Zhiping Zhang
Wei Wang
Jinyu Fan
Dong Men
Jiaoyu Deng
Hongping Wei
Xian-En Zhang
Zongqiang Cui
Chinese Academy of Sciences · CNWuhan Institute of Virology · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Live cell imaging of mRNA-protein interactions makes it possible to study posttranscriptional processes of cellular and viral gene expression under physiological conditions. In this study, red color mCherry-based trimolecular fluorescence complementation (TriFC) systems were constructed as new tools for visualizing mRNA-protein interaction in living cells using split mCherry fragments and HIV REV-RRE and TAT-TAR peptide-RNA interaction pairs. The new mCherry TriFC systems were successfully used to image RNA-protein interactions such as that between influenza viral protein NS1 and the 5' UTR of influenza viral mRNAs NS, M, and NP. Upon combination of an mCherry TriFC system with a Venus TriFC system, multiple mRNA-protein interactions could be detected simultaneously in the same cells. Then, the new mCherry TriFC system was used for imaging of interactions between influenza A virus mRNAs and some of adapter proteins in cellular TAP nuclear export pathway in live cells. Adapter proteins Aly and UAP56 were found to associate with three kinds of viral mRNAs. Another adapter protein, splicing factor 9G8, only interacted with intron-containing spliced M2 mRNA. Co-immunoprecipitation assays with influenza A virus-infected cells confirmed these interactions. This study provides long-wavelength-spectrum TriFC systems as new tools for visualizing RNA-protein interactions in live cells and help to understand the nuclear export mechanism of influenza A viral mRNAs.

Indexed as

5' Untranslated RegionsAnimalsDEAD-box RNA HelicasesDogsGene ExpressionGreen Fluorescent ProteinsHIV-1HIV Long Terminal RepeatHost-Pathogen InteractionsHumansInfluenza A virusLuminescent ProteinsMadin Darby Canine Kidney CellsMolecular ImagingNuclear ProteinsPlasmids5' Untranslated RegionsALYREF protein, humanDDX39B protein, humanDEAD-box RNA HelicasesGreen Fluorescent ProteinsLuminescent ProteinsM2 protein, Influenza A virusNuclear ProteinsRed Fluorescent Proteinrev Gene Products, Human Immunodeficiency Virusrev protein, Human Immunodeficiency Virus-1RNA-Binding ProteinsSerine-Arginine Splicing Factorstat Gene Products, Human Immunodeficiency VirusTranscription FactorsViral Matrix ProteinsViral Nonstructural ProteinsViroporin Proteins

Identifiers

PMID24260494
PMCPMC3829953
OpenAlexW2080171266

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.