Evidence map›Paper›PMID 24260336›Full record

ArticlePloS one2013

Regulation of rhodopsin-eGFP distribution in transgenic xenopus rod outer segments by light.

Mohammad Haeri, Peter D Calvert, Eduardo Solessio, Edward N Pugh, Barry E Knox

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Rhodopsin Oligomerization and Aggregation.The Journal of membrane biology · 2019
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mohammad HaeriDepartments of Neuroscience and Physiology, Biochemistry and Molecular Biology, and Ophthalmology, SUNY Upstate Medical University, Syracuse, New York, United States of America.
Peter D Calvert
Eduardo Solessio
Edward N Pugh
Barry E Knox

Funding

MECHANISMS OF VISUAL TRANSDUCTIONR01EY002660 · NEI · UNIVERSITY OF PENNSYLVANIA · PI PUGH, EDWARD N · 1985 to 2021
$11.4M
Supplement for ZetaSizer instrumentR01EY018421 · NEI · UPSTATE MEDICAL UNIVERSITY · PI CALVERT, PETER DEANE · 2007 to 2025
$6.2M
STRUCTURE/FUNCTION OF SHORT WAVELENGTH VISUAL PIGMENTSR01EY011256 · NEI · UPSTATE MEDICAL UNIVERSITY · PI KNOX, BARRY E · 1997 to 2011
$2.6M
MOLECULAR MECHANISMS OF PHOTORECEPTOR FUNCTIONR01EY012975 · NEI · UPSTATE MEDICAL UNIVERSITY · PI KNOX, BARRY E · 2000 to 2010
$2.3M
NEI NIH HHS EY018421NEI NIH HHS EY02660NEI NIH HHS EY-11256NEI NIH HHS EY-12975NEI NIH HHS R01 EY002660NEI NIH HHS R01 EY011256NEI NIH HHS R01 EY012975NEI NIH HHS R01 EY018421
6 · The paper itself

Abstract

The rod outer segment (OS), comprised of tightly stacked disk membranes packed with rhodopsin, is in a dynamic equilibrium governed by a diurnal rhythm with newly synthesized membrane inserted at the OS base balancing membrane loss from the distal tip via disk shedding. Using transgenic Xenopus and live cell confocal imaging, we found OS axial variation of fluorescence intensity in cells expressing a fluorescently tagged rhodopsin transgene. There was a light synchronized fluctuation in intensity, with higher intensity in disks formed at night and lower intensity for those formed during the day. This fluctuation was absent in constant light or dark conditions. There was also a slow modulation of the overall expression level that was not synchronized with the lighting cycle or between cells in the same retina. The axial variations of other membrane-associated fluorescent proteins, eGFP-containing two geranylgeranyl acceptor sites and eGFP fused to the transmembrane domain of syntaxin, were greatly reduced or not detectable, respectively. In acutely light-adapted rods, an arrestin-eGFP fusion protein also exhibited axial variation. Both the light-sensitive Rho-eGFP and arrestin-eGFP banding were in phase with the previously characterized birefringence banding (Kaplan, Invest. Ophthalmol. Vis. Sci. 21, 395-402 1981). In contrast, endogenous rhodopsin did not exhibit such axial variation. Thus, there is an axial inhomogeneity in membrane composition or structure, detectable by the rhodopsin transgene density distribution and regulated by the light cycle, implying a light-regulated step for disk assembly in the OS. The impact of these results on the use of chimeric proteins with rhodopsin fused to fluorescent proteins at the carboxyl terminus is discussed.

Indexed as

AnimalsArrestinBirefringenceCircadian ClocksGreen Fluorescent ProteinsLightQa-SNARE ProteinsRetinaRhodopsinRod Cell Outer SegmentXenopusArrestinenhanced green fluorescent proteinGreen Fluorescent ProteinsQa-SNARE ProteinsRhodopsin

Identifiers

PMID24260336
PMCPMC3829889

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.