Evidence map›Paper›PMID 24259709›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Contributions of intrinsic mutation rate and selfish selection to levels of de novo HRAS mutations in the paternal germline.

Eleni Giannoulatou, Gilean McVean, Indira B Taylor, Simon J McGowan, Geoffrey J Maher, Zamin Iqbal, Susanne P Pfeifer, Isaac Turner, Emma M M Burkitt Wright, Jennifer Shorto and 9 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 2 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 2 syntheses or guidelines pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Article
  4. Stem cell competition.Current topics in developmental biology · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. [Sperm Mosaic Variants and Their Influence on the Offspring].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2024
    Review
  9. Article
  10. Case Report: Sequential postzygoticFrontiers in genetics · 2023
    Article
  11. Article
  12. Review
  13. Article
  14. The RASopathies: from pathogenetics to therapeutics.Disease models & mechanisms · 2022
    Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Germline and sporadic cancers driven by the RAS pathway: parallels and contrasts.Annals of oncology : official journal of the European Society for Medical Oncology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 3 countries.

Eleni GiannoulatouWeatherall Institute of Molecular Medicine, University of Oxford, Oxford OX3 9DS, United Kingdom.
Gilean McVean
Indira B Taylor
Simon J McGowan
Geoffrey J Maher
Zamin Iqbal
Susanne P Pfeifer
Isaac Turner
Emma M M Burkitt Wright
Jennifer Shorto
Aysha Itani
Karen Turner
Lorna Gregory
David Buck
Ewa Rajpert-De Meyts
Leendert H J Looijenga
Bronwyn Kerr
Andrew O M Wilkie
Anne Goriely
University of Oxford · GBCentre for Human Genetics · GBUniversity of Manchester · GBMRC Weatherall Institute of Molecular Medicine · GBOxford Fertility · GBCopenhagen University Hospital · DKErasmus University Rotterdam · NL

Funding

Medical Research Council G0900747Wellcome TrustWellcome Trust 086084Wellcome Trust 090120Wellcome Trust 090532Wellcome Trust 091182
6 · The paper itself

Abstract

The RAS proto-oncogene Harvey rat sarcoma viral oncogene homolog (HRAS) encodes a small GTPase that transduces signals from cell surface receptors to intracellular effectors to control cellular behavior. Although somatic HRAS mutations have been described in many cancers, germline mutations cause Costello syndrome (CS), a congenital disorder associated with predisposition to malignancy. Based on the epidemiology of CS and the occurrence of HRAS mutations in spermatocytic seminoma, we proposed that activating HRAS mutations become enriched in sperm through a process akin to tumorigenesis, termed selfish spermatogonial selection. To test this hypothesis, we quantified the levels, in blood and sperm samples, of HRAS mutations at the p.G12 codon and compared the results to changes at the p.A11 codon, at which activating mutations do not occur. The data strongly support the role of selection in determining HRAS mutation levels in sperm, and hence the occurrence of CS, but we also found differences from the mutation pattern in tumorigenesis. First, the relative prevalence of mutations in sperm correlates weakly with their in vitro activating properties and occurrence in cancers. Second, specific tandem base substitutions (predominantly GC>TT/AA) occur in sperm but not in cancers; genomewide analysis showed that this same mutation is also overrepresented in constitutional pathogenic and polymorphic variants, suggesting a heightened vulnerability to these mutations in the germline. We developed a statistical model to show how both intrinsic mutation rate and selfish selection contribute to the mutational burden borne by the paternal germline.

Indexed as

AdultAgedAgingCarcinogenesisCodonCostello SyndromeGerm CellsHumansMaleMiddle AgedModels, StatisticalMutationProto-Oncogene MasProto-Oncogene Proteins p21(ras)Selection, GeneticCodonHRAS protein, humanMAS1 protein, humanProto-Oncogene MasProto-Oncogene Proteins p21(ras)male mutation biaspaternal age effectRASopathytestis

Identifiers

PMID24259709
PMCPMC3864328
OpenAlexW2031249786

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.