Evidence map›Paper›PMID 24257749›Full record

ArticleThe Journal of biological chemistry2014

Control of KirBac3.1 potassium channel gating at the interface between cytoplasmic domains.

Lejla Zubcevic, Vassiliy N Bavro, Joao R C Muniz, Matthias R Schmidt, Shizhen Wang, Rita De Zorzi, Catherine Venien-Bryan, Mark S P Sansom, Colin G Nichols, Stephen J Tucker

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The Lipid Activation Mechanism of a Transmembrane Potassium Channel.Journal of the American Chemical Society · 2020
    Article
  7. Article
  8. Kir2.2 p.Thr140Met: a genetic susceptibility to sporadic periodic paralysis.Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology · 2018
    Article
  9. Calcium channel gating.Pflugers Archiv : European journal of physiology · 2018
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Structure of potassium channels.Cellular and molecular life sciences : CMLS · 2015
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Lejla ZubcevicFrom the Biological Physics Group, Clarendon Laboratory, University of Oxford, Oxford OX1 3PU, United Kingdom.
Vassiliy N Bavro
Joao R C Muniz
Matthias R Schmidt
Shizhen Wang
Rita De Zorzi
Catherine Venien-Bryan
Mark S P Sansom
Colin G Nichols
Stephen J Tucker
University of Oxford · GBWashington University in St. Louis · USCentre National de la Recherche Scientifique · FRHarvard University · USUniversidade de São Paulo · BR

Funding

Rectification &Block of Ion Channel CurrentsR01HL054171 · NHLBI · WASHINGTON UNIVERSITY · PI NICHOLS, COLIN G · 1995 to 2017
$4.5M
Biotechnology and Biological Sciences Research Council B19456Biotechnology and Biological Sciences Research Council BB/F013035/1Biotechnology and Biological Sciences Research Council BB/H000267/1Biotechnology and Biological Sciences Research Council BB/I019855/1Biotechnology and Biological Sciences Research Council BB/L002558/1Biotechnology and Biological Sciences Research Council BBS/B/16011Biotechnology and Biological Sciences Research Council BEP17032NHLBI NIH HHS HL54171NHLBI NIH HHS R01 HL054171Wellcome Trust 084655
6 · The paper itself

Abstract

KirBac channels are prokaryotic homologs of mammalian inwardly rectifying potassium (Kir) channels, and recent structures of KirBac3.1 have provided important insights into the structural basis of gating in Kir channels. In this study, we demonstrate that KirBac3.1 channel activity is strongly pH-dependent, and we used x-ray crystallography to determine the structural changes that arise from an activatory mutation (S205L) located in the cytoplasmic domain (CTD). This mutation stabilizes a novel energetically favorable open conformation in which changes at the intersubunit interface in the CTD also alter the electrostatic potential of the inner cytoplasmic cavity. These results provide a structural explanation for the activatory effect of this mutation and provide a greater insight into the role of the CTD in Kir channel gating.

Indexed as

Amino Acid SubstitutionBacterial ProteinsIon Channel GatingMagnetospirillumMutation, MissensePotassium Channels, Inwardly RectifyingProtein Structure, TertiaryBacterial ProteinsPotassium Channels, Inwardly RectifyingChannel GatingCrystal StructureIon ChannelsKirBacKir ChannelMembrane ProteinsMolecular DynamicsPotassium Channels

Identifiers

PMID24257749
PMCPMC3879539
OpenAlexW2063697082

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.