Evidence map›Paper›PMID 24257745›Full record

ArticleThe Journal of biological chemistry2014

Overlapping and distinct roles of Aspergillus fumigatus UDP-glucose 4-epimerases in galactose metabolism and the synthesis of galactose-containing cell wall polysaccharides.

Mark J Lee, Fabrice N Gravelat, Robert P Cerone, Stefanie D Baptista, Paolo V Campoli, Se-In Choe, Ilia Kravtsov, Evgeny Vinogradov, Carole Creuzenet, Hong Liu and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 108 citations in OpenAlex.

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  13. Identification of Compounds PreventingInternational journal of molecular sciences · 2023
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Mark J LeeFrom the Department of Microbiology and Immunology, McGill University, Montréal, Québec H3A 2B4, Canada.
Fabrice N Gravelat
Robert P Cerone
Stefanie D Baptista
Paolo V Campoli
Se-In Choe
Ilia Kravtsov
Evgeny Vinogradov
Carole Creuzenet
Hong Liu
Albert M Berghuis
Jean-Paul Latgé
Scott G Filler
Thierry Fontaine
Donald C Sheppard
McGill University · CAInstitut Pasteur · FRUniversity of California, Los Angeles · USNational Academies of Sciences, Engineering, and Medicine · USWestern University · CA

Funding

UCLA Clinical and Translational Science InstituteUL1TR000124 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2012 to 2015
$57.0M
Transcriptional regulation of A. fumigatus virulenceR01AI073829 · NIAID · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI FILLER, SCOTT G · 2007 to 2015
$2.8M
CIHRNCATS NIH HHS UL1 TR000124NIAID NIH HHS R01 AI073829NIAID NIH HHS R01AI073829
6 · The paper itself

Abstract

The cell wall of Aspergillus fumigatus contains two galactose-containing polysaccharides, galactomannan and galactosaminogalactan, whose biosynthetic pathways are not well understood. The A. fumigatus genome contains three genes encoding putative UDP-glucose 4-epimerases, uge3, uge4, and uge5. We undertook this study to elucidate the function of these epimerases. We found that uge4 is minimally expressed and is not required for the synthesis of galactose-containing exopolysaccharides or galactose metabolism. Uge5 is the dominant UDP-glucose 4-epimerase in A. fumigatus and is essential for normal growth in galactose-based medium. Uge5 is required for synthesis of the galactofuranose (Galf) component of galactomannan and contributes galactose to the synthesis of galactosaminogalactan. Uge3 can mediate production of both UDP-galactose and UDP-N-acetylgalactosamine (GalNAc) and is required for the production of galactosaminogalactan but not galactomannan. In the absence of Uge5, Uge3 activity is sufficient for growth on galactose and the synthesis of galactosaminogalactan containing lower levels of galactose but not the synthesis of Galf. A double deletion of uge5 and uge3 blocked growth on galactose and synthesis of both Galf and galactosaminogalactan. This study is the first survey of glucose epimerases in A. fumigatus and contributes to our understanding of the role of these enzymes in metabolism and cell wall synthesis.

Indexed as

Aspergillus fumigatusCell WallFungal PolysaccharidesFungal ProteinsGalactoseUDPglucose 4-EpimeraseFungal PolysaccharidesFungal ProteinsGalactoseUDPglucose 4-EpimeraseCarbohydrate BiosynthesisCell WallGalactose MetabolismGlycobiologyMycologyPolysaccharide

Identifiers

PMID24257745
PMCPMC3894311
OpenAlexW1976510931

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.