Evidence map›Paper›PMID 24256812›Full record

SynthesisHuman molecular genetics2014

A genome-wide association meta-analysis identifies a novel locus at 17q11.2 associated with sporadic amyotrophic lateral sclerosis.

Isabella Fogh, Antonia Ratti, Cinzia Gellera, Kuang Lin, Cinzia Tiloca, Valentina Moskvina, Lucia Corrado, Gianni Sorarù, Cristina Cereda, Stefania Corti and 56 more

Registry-linked trialOpen access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Human molecular genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00821132 (Identification of Genes Causing Familial ALS or Increasing Risk for Sporadic ALS and ALS With Frontotemporal Dementia and Understanding Disease Mechanism.), which is not on this map. Cited by 67 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed, 3 pooled it
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00821132 completednot on this map

Identification of Genes Causing Familial ALS or Increasing Risk for Sporadic ALS and ALS With Frontotemporal Dementia and Understanding Disease Mechanism.

TypeobservationalSponsorNorthwestern UniversityRan1991 to 2023Enrolled13,521ConditionsAmyotrophic Lateral Sclerosis (ALS), Familial Amyotrophic Lateral Sclerosis, ALS With Frontotemporal Dementia (ALS/FTD), Lou Gehrig's DiseaseArmsGenetic study of ALS families
3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 3 syntheses or guidelines pooled it, 141 citations in OpenAlex.

  1. Pooled it
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  11. SARM1 detection in myelinating glia:Frontiers in cellular neuroscience · 2023
    Article
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  18. Motoneuron Diseases.Advances in neurobiology · 2022
    Article
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

66 authors at 20 institutions in 9 countries.

Isabella FoghDepartment of Neuroscience.
Antonia Ratti
Cinzia Gellera
Kuang Lin
Cinzia Tiloca
Valentina Moskvina
Lucia Corrado
Gianni Sorarù
Cristina Cereda
Stefania Corti
Davide Gentilini
Daniela Calini
Barbara Castellotti
Letizia Mazzini
Giorgia Querin
Stella Gagliardi
Roberto Del Bo
Francesca L Conforti
Gabriele Siciliano
Maurizio Inghilleri
Francesco Saccà
Paolo Bongioanni
Silvana Penco
Massimo Corbo
Sandro Sorbi
Massimiliano Filosto
Alessandra Ferlini
Anna M Di Blasio
Stefano Signorini
Aleksey Shatunov
Ashley Jones
Pamela J Shaw
Karen E Morrison
Anne E Farmer
Philip Van Damme
Wim Robberecht
Adriano Chiò
Bryan J Traynor
Michael Sendtner
Judith Melki
Vincent Meininger
Orla Hardiman
Peter M Andersen
Nigel P Leigh
Jonathan D Glass
Daniel Overste
Frank P Diekstra
Jan H Veldink
Michael A van Es
Christopher E Shaw
Michael E Weale
Cathryn M Lewis
Julie Williams
Robert H Brown
John E Landers
Nicola Ticozzi
Mauro Ceroni
Elena Pegoraro
Giacomo P Comi
Sandra D'Alfonso
Leonard H van den Berg
Franco Taroni
Ammar Al-Chalabi
John Powell
Vincenzo Silani
SLAGEN Consortium and Collaborators
IRCCS Istituto Auxologico Italiano · ITUniversity Medical Center Utrecht · NLFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITFondazione IRCCS Istituto Neurologico Carlo Besta · ITKing's College London · GBUniversity of Padua · ITAzienda Socio Sanitaria Territoriale Grande Ospedale Metropolitano Niguarda · ITCardiff University · GBKU Leuven · BEUniversity of Massachusetts Chan Medical School · USAssistance Publique – Hôpitaux de Paris · FRAzienda Ospedaliera Citta' della Salute e della Scienza di Torino · ITAzienda Ospedaliera di Desio e Vimercate · ITAzienda Ospedaliera Universitaria Pisana · ITAzienda Socio Sanitaria Territoriale degli Spedali Civili di Brescia · ITBrighton and Sussex Medical School · GBEmory University · USFederico II University Hospital · ITFondazione Istituto Neurologico Nazionale Casimiro Mondino · ITInserm · FR

Funding

Genome wide SNP analysis in Amyotrophic Lateral SclerosisZIAAG000933 · NIA · NATIONAL INSTITUTE ON AGING · PI TRAYNOR, BRYAN · 2009 to 2025
$9.8M
Identification of genes causative for familial ALS gene using exome sequencingR01NS073873 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LANDERS, JOHN E · 2011 to 2019
$4.6M
Full Human Genome Sequencing in ALSRC2NS070342 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BROWN, ROBERT H. · 2009 to 2010
$3.6M
High-Throughput Genomic Approaches to Identify ALS GenesR01NS050557 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BROWN, ROBERT H. · 2005 to 2009
$2.5M
Medical Research Council G0500289Medical Research Council G0501573Medical Research Council G0600974Medical Research Council G0701420Medical Research Council G0900635Medical Research Council G0900688Medical Research Council G0902227Medical Research Council G1100695Medical Research Council MC_G1000733Medical Research Council MR/J006742/1Medical Research Council MR/K013041/1Medical Research Council MR/K01417X/1Medical Research Council MR/L010305/1Medical Research Council MR/L501517/1Medical Research Council MR/L501529/1NINDS NIH HHS 1R01NS073873NINDS NIH HHS R01 NS050557NINDS NIH HHS R01 NS073873NINDS NIH HHS RC2 NS070342NINDS NIH HHS RC2-NS070-342Telethon GTB12001Wellcome Trust 070122/A/02/ZWellcome Trust 089701
6 · The paper itself

Abstract

Identification of mutations at familial loci for amyotrophic lateral sclerosis (ALS) has provided novel insights into the aetiology of this rapidly progressing fatal neurodegenerative disease. However, genome-wide association studies (GWAS) of the more common (∼90%) sporadic form have been less successful with the exception of the replicated locus at 9p21.2. To identify new loci associated with disease susceptibility, we have established the largest association study in ALS to date and undertaken a GWAS meta-analytical study combining 3959 newly genotyped Italian individuals (1982 cases and 1977 controls) collected by SLAGEN (Italian Consortium for the Genetics of ALS) together with samples from Netherlands, USA, UK, Sweden, Belgium, France, Ireland and Italy collected by ALSGEN (the International Consortium on Amyotrophic Lateral Sclerosis Genetics). We analysed a total of 13 225 individuals, 6100 cases and 7125 controls for almost 7 million single-nucleotide polymorphisms (SNPs). We identified a novel locus with genome-wide significance at 17q11.2 (rs34517613 with P = 1.11 × 10(-8); OR 0.82) that was validated when combined with genotype data from a replication cohort (P = 8.62 × 10(-9); OR 0.833) of 4656 individuals. Furthermore, we confirmed the previously reported association at 9p21.2 (rs3849943 with P = 7.69 × 10(-9); OR 1.16). Finally, we estimated the contribution of common variation to heritability of sporadic ALS as ∼12% using a linear mixed model accounting for all SNPs. Our results provide an insight into the genetic structure of sporadic ALS, confirming that common variation contributes to risk and that sufficiently powered studies can identify novel susceptibility loci.

Indexed as

Genome-Wide Association StudyAmyotrophic Lateral SclerosisCase-Control StudiesChromosomes, Human, Pair 17HumansPrognosis

Identifiers

PMID24256812
PMCPMC3959809
OpenAlexW2127034229

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.