Evidence map›Paper›PMID 24255098›Full record

ArticleDevelopment (Cambridge, England)2013

A small molecule screen identifies a novel compound that induces a homeotic transformation in Hydra.

Kristine M Glauber, Catherine E Dana, Steve S Park, David A Colby, Yukihiko Noro, Toshitaka Fujisawa, A Richard Chamberlin, Robert E Steele

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 41 citations in OpenAlex.

  1. Mechanical stretch regulates macropinocytosis inMolecular biology of the cell · 2024
    Article
  2. Article
  3. Article
  4. Review
  5. The Hippo pathway regulates axis formation and morphogenesis inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Article
  7. Article
  8. Stem cell differentiation trajectories inScience (New York, N.Y.) · 2019
    Article
  9. Article
  10. Article
  11. Review
  12. Dynamics of Mouth Opening in Hydra.Biophysical journal · 2016
    Article
  13. Review
  14. Article
  15. Generation of transgenic Hydra by embryo microinjection.Journal of visualized experiments : JoVE · 2014
    Article
  16. PIWI proteins and PIWI-interacting RNAs function in Hydra somatic stem cells.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Kristine M GlauberDepartment of Biological Chemistry, University of California, Irvine, CA 92697, USA.
Catherine E Dana
Steve S Park
David A Colby
Yukihiko Noro
Toshitaka Fujisawa
A Richard Chamberlin
Robert E Steele
University of California, Irvine · USNational Institute of Genetics · JP

Funding

NEW SIGNALING PATHWAY PROBES BASED ON NATURAL TOXINSR01GM057550 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CHAMBERLIN, A RICHARD · 1998 to 2007
$1.5M
Tools for genetic and genomic studies in HydraR24GM080537 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI STEELE, ROBERT · 2008 to 2011
$1.2M
NIGMS NIH HHS R01 GM057550NIGMS NIH HHS R01-GM057550NIGMS NIH HHS R24 GM080537NIGMS NIH HHS R24-GM080537
6 · The paper itself

Abstract

Developmental processes such as morphogenesis, patterning and differentiation are continuously active in the adult Hydra polyp. We carried out a small molecule screen to identify compounds that affect patterning in Hydra. We identified a novel molecule, DAC-2-25, that causes a homeotic transformation of body column into tentacle zone. This transformation occurs in a progressive and polar fashion, beginning at the oral end of the animal. We have identified several strains that respond to DAC-2-25 and one that does not, and we used chimeras from these strains to identify the ectoderm as the target tissue for DAC-2-25. Using transgenic Hydra that express green fluorescent protein under the control of relevant promoters, we examined how DAC-2-25 affects tentacle patterning. Genes whose expression is associated with the tentacle zone are ectopically expressed upon exposure to DAC-2-25, whereas those associated with body column tissue are turned off as the tentacle zone expands. The expression patterns of the organizer-associated gene HyWnt3 and the hypostome-specific gene HyBra2 are unchanged. Structure-activity relationship studies have identified features of DAC-2-25 that are required for activity and potency. This study shows that small molecule screens in Hydra can be used to dissect patterning processes.

Indexed as

AnimalsAnimals, Genetically ModifiedBody PatterningEctodermGene Expression Regulation, DevelopmentalGreen Fluorescent ProteinsHydraMorphogenesisPyridonesSmall Molecule LibrariesStructure-Activity RelationshipWnt3 ProteinDAC-2-25Green Fluorescent ProteinsPyridonesSmall Molecule LibrariesWnt3 ProteinCnidariaHydraPattern formationPyridoneRegenerationSmall molecule

Identifiers

PMID24255098
PMCPMC3833435
OpenAlexW2140015119

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.