Evidence map›Paper›PMID 24254125›Full record

ArticleThe Plant cell2013

HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 is required for circadian periodicity through the promotion of nucleo-cytoplasmic mRNA export in Arabidopsis.

Dana R MacGregor, Peter Gould, Julia Foreman, Jayne Griffiths, Susannah Bird, Rhiannon Page, Kelly Stewart, Gavin Steel, Jack Young, Konrad Paszkiewicz and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. The HOS1-PIF4/5 module controls callus formation inPlant signaling & behavior · 2023
    Article
  6. Article
  7. Current Insights into mPlants (Basel, Switzerland) · 2023
    Review
  8. Article
  9. Review
  10. Function of Nuclear Pore Complexes in Regulation of Plant Defense Signaling.International journal of molecular sciences · 2022
    Review
  11. Localizing Total mRNA in Plant Cells.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  12. CRISPR/Cas9-Mediated Knockout ofPlants (Basel, Switzerland) · 2021
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Dana R MacGregorBiosciences, College of Life and Environmental Sciences, University of Exeter, Exeter EX4 4QD, United Kingdom.
Peter Gould
Julia Foreman
Jayne Griffiths
Susannah Bird
Rhiannon Page
Kelly Stewart
Gavin Steel
Jack Young
Konrad Paszkiewicz
Andrew J Millar
Karen J Halliday
Anthony J Hall
Steven Penfield
University of Edinburgh · GBUniversity of Exeter · GBUniversity of Liverpool · GBUniversity of York · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F005237/1Biotechnology and Biological Sciences Research Council BB/F005296/1Biotechnology and Biological Sciences Research Council BB/F005296/2Biotechnology and Biological Sciences Research Council BB/F005318/1
6 · The paper itself

Abstract

Cold acclimation has been shown to be attenuated by the degradation of the INDUCER OF CBF EXPRESSION1 protein by the E3 ubiquitin ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 (HOS1). However, recent work has suggested that HOS1 may have a wider range of roles in plants than previously appreciated. Here, we show that hos1 mutants are affected in circadian clock function, exhibiting a long-period phenotype in a wide range of temperature and light environments. We demonstrate that hos1 mutants accumulate polyadenylated mRNA in the nucleus and that the circadian defect in hos1 is shared by multiple mutants with aberrant mRNA export, but not in a mutant attenuated in nucleo-cytoplasmic transport of microRNAs. As revealed by RNA sequencing, hos1 exhibits gross changes to the transcriptome with genes in multiple functional categories being affected. In addition, we show that hos1 and other previously described mutants with altered mRNA export affect cold signaling in a similar manner. Our data support a model in which altered mRNA export is important for the manifestation of hos1 circadian clock defects and suggest that HOS1 may indirectly affect cold signaling through disruption of the circadian clock.

Indexed as

RNA TransportArabidopsisArabidopsis ProteinsCell NucleusCircadian ClocksCold TemperatureCytoplasmDEAD-box RNA HelicasesGene Expression Regulation, PlantIntracellular Signaling Peptides and ProteinsMutationNuclear ProteinsPlants, Genetically ModifiedPolyadenylationPromoter Regions, GeneticRNA, MessengerArabidopsis ProteinsDEAD-box RNA HelicasesHOS1 protein, ArabidopsisIntracellular Signaling Peptides and ProteinsLOS4 protein, ArabidopsisNuclear ProteinsRNA, MessengerR-SNARE ProteinsSAR1 protein, Arabidopsis

Identifiers

PMID24254125
PMCPMC3875725
OpenAlexW2116574352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.